STRINGSTRING
LOC101158525 LOC101158525 H2MST1_ORYLA H2MST1_ORYLA pikfyve pikfyve depdc1b depdc1b LOC101167824 LOC101167824 dvl2 dvl2 depdc4 depdc4 depdc7 depdc7 rgs11 rgs11 plek2 plek2 prex2 prex2 LOC101160614 LOC101160614 rgs7 rgs7 prex1 prex1 rgs9 rgs9 deptor deptor dvl1 dvl1 LOC101168163 LOC101168163 depdc1 depdc1 LOC101162526 LOC101162526 H2MFW2_ORYLA H2MFW2_ORYLA dvl3 dvl3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101158525Rap guanine nucleotide exchange factor (GEF) 3. (798 aa)
H2MST1_ORYLARap guanine nucleotide exchange factor (GEF) 4. (421 aa)
pikfyvePhosphoinositide kinase, FYVE finger containing. (2070 aa)
depdc1bRho-GAP domain-containing protein. (530 aa)
LOC101167824Zgc:171558. (1002 aa)
dvl2Dishevelled segment polarity protein 2. (770 aa)
depdc4Si:ch211-265o23.1. (501 aa)
depdc7DEP domain containing 7, paralog a. (533 aa)
rgs11Regulator of G protein signaling 11. (461 aa)
plek2Pleckstrin 2. (354 aa)
prex2Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2. (1573 aa)
LOC101160614Regulator of G protein signaling 6. (424 aa)
rgs7Regulator of G protein signaling 7a. (460 aa)
prex1Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1. (1661 aa)
rgs9Regulator of G protein signaling 9b. (657 aa)
deptorDEP domain containing MTOR-interacting protein. (405 aa)
dvl1Dishevelled segment polarity protein 1a. (728 aa)
LOC101168163Uncharacterized protein. (493 aa)
depdc1DEP domain containing 1a. (839 aa)
LOC101162526DEP domain containing 7. (532 aa)
H2MFW2_ORYLASi:dkeyp-97e7.9. (398 aa)
dvl3Dishevelled segment polarity protein 3a. (685 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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