23 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101154954	Zgc:55558. (189 aa)
	LOC101163576	Small GTPase Ras-dva-3. (208 aa)
	LOC101156149	Uncharacterized protein. (201 aa)
	LOC101161855	Ras homolog, mTORC1 binding. (184 aa)
	LOC101155833	RAP2A, member of RAS oncogene family b. (183 aa)
	LOC101167529	RAP1A, member of RAS oncogene family b. (185 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (186 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101171042	DIRAS family, GTP-binding RAS-like 1b. (198 aa)
	LOC101172864	Uncharacterized protein. (255 aa)
	mras	Muscle RAS oncogene homolog. (209 aa)
	rap2c	RAP2C, member of RAS oncogene family. (183 aa)
	rasd1	Uncharacterized protein. (264 aa)
	LOC101157118	V-ral simian leukemia viral oncogene homolog Ba (ras related). (207 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	LOC101174431	RAS related. (196 aa)
	rras2	RAS related 2. (202 aa)
	LOC101156643	Ras homolog, mTORC1 binding like 1. (184 aa)
	LOC101160603	Uncharacterized protein. (184 aa)
	RAP2A	Uncharacterized protein. (183 aa)
	LOC101167252	V-ral simian leukemia viral oncogene homolog Aa (ras related). (206 aa)
	LOC101171247	RAP1A, member of RAS oncogene family a. (202 aa)
	LOC101164795	Uncharacterized protein. (199 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101154954	LOC101167529	ENSORLP00000030026	ENSORLP00000007312	Zgc:55558.	RAP1A, member of RAS oncogene family b.	0.403
LOC101154954	LOC101171247	ENSORLP00000030026	ENSORLP00000042612	Zgc:55558.	RAP1A, member of RAS oncogene family a.	0.406
LOC101154954	LOC101172864	ENSORLP00000030026	ENSORLP00000021855	Zgc:55558.	Uncharacterized protein.	0.405
LOC101154954	hras	ENSORLP00000030026	ENSORLP00000014318	Zgc:55558.	HRas proto-oncogene, GTPase a.	0.911
LOC101154954	kras	ENSORLP00000030026	ENSORLP00000031976	Zgc:55558.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.901
LOC101156149	LOC101167529	ENSORLP00000001677	ENSORLP00000007312	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.411
LOC101156149	LOC101171247	ENSORLP00000001677	ENSORLP00000042612	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.419
LOC101156149	LOC101172864	ENSORLP00000001677	ENSORLP00000021855	Uncharacterized protein.	Uncharacterized protein.	0.410
LOC101156643	LOC101160603	ENSORLP00000037294	ENSORLP00000037761	Ras homolog, mTORC1 binding like 1.	Uncharacterized protein.	0.901
LOC101156643	LOC101161855	ENSORLP00000037294	ENSORLP00000004585	Ras homolog, mTORC1 binding like 1.	Ras homolog, mTORC1 binding.	0.901
LOC101157118	LOC101167529	ENSORLP00000030288	ENSORLP00000007312	V-ral simian leukemia viral oncogene homolog Ba (ras related).	RAP1A, member of RAS oncogene family b.	0.412
LOC101157118	LOC101171247	ENSORLP00000030288	ENSORLP00000042612	V-ral simian leukemia viral oncogene homolog Ba (ras related).	RAP1A, member of RAS oncogene family a.	0.419
LOC101157118	LOC101172864	ENSORLP00000030288	ENSORLP00000021855	V-ral simian leukemia viral oncogene homolog Ba (ras related).	Uncharacterized protein.	0.408
LOC101160603	LOC101156643	ENSORLP00000037761	ENSORLP00000037294	Uncharacterized protein.	Ras homolog, mTORC1 binding like 1.	0.901
LOC101160603	LOC101161855	ENSORLP00000037761	ENSORLP00000004585	Uncharacterized protein.	Ras homolog, mTORC1 binding.	0.901
LOC101161855	LOC101156643	ENSORLP00000004585	ENSORLP00000037294	Ras homolog, mTORC1 binding.	Ras homolog, mTORC1 binding like 1.	0.901
LOC101161855	LOC101160603	ENSORLP00000004585	ENSORLP00000037761	Ras homolog, mTORC1 binding.	Uncharacterized protein.	0.901
LOC101167252	LOC101167529	ENSORLP00000041223	ENSORLP00000007312	V-ral simian leukemia viral oncogene homolog Aa (ras related).	RAP1A, member of RAS oncogene family b.	0.409
LOC101167252	LOC101171247	ENSORLP00000041223	ENSORLP00000042612	V-ral simian leukemia viral oncogene homolog Aa (ras related).	RAP1A, member of RAS oncogene family a.	0.416
LOC101167252	LOC101172864	ENSORLP00000041223	ENSORLP00000021855	V-ral simian leukemia viral oncogene homolog Aa (ras related).	Uncharacterized protein.	0.407