STRINGSTRING
LOC101174729 LOC101174729 ahr ahr tal2 tal2 npas4 npas4 LOC101165163 LOC101165163 LOC101162314 LOC101162314 LOC101162699 LOC101162699 LOC105356519 LOC105356519 NEUROD2 NEUROD2 LOC101172602 LOC101172602 LOC101175459 LOC101175459 LOC100049435 LOC100049435 LOC100049439 LOC100049439 ferd3l ferd3l twist1 twist1 HES2 HES2 LOC101165450 LOC101165450 atoh1 atoh1 LOC100820722 LOC100820722 LOC101161725 LOC101161725 hes4 hes4 LOC101175434 LOC101175434 ebf3 ebf3 MXI1 MXI1 mlxip mlxip scx scx LOC101161895 LOC101161895 mxd4 mxd4 mxd3 mxd3 Npas1 Npas1 twist1-2 twist1-2 LOC101168209 LOC101168209 LOC101162765 LOC101162765 hes1 hes1 mnt mnt msc msc ncoa2 ncoa2 LOC101163844 LOC101163844 ptf1a ptf1a LOC101171533 LOC101171533 tcf12 tcf12 bhlhe22 bhlhe22 LOC101164660 LOC101164660 LOC101172430 LOC101172430 srebf1 srebf1 ARNTL2 ARNTL2 bhlhe23 bhlhe23 LOC100049417 LOC100049417 hes7 hes7 olig2 olig2 arnt arnt H2M505_ORYLA H2M505_ORYLA LOC101174183 LOC101174183 ASCL4 ASCL4 bhlhe41 bhlhe41 H2M9H6_ORYLA H2M9H6_ORYLA NCOA3 NCOA3 sim1 sim1 LOC101156489 LOC101156489 LOC101161879 LOC101161879 atoh7 atoh7 H2MFW7_ORYLA H2MFW7_ORYLA tfe3 tfe3 LOC101162828 LOC101162828 mesp mesp srebf2 srebf2 LOC101164270 LOC101164270 id2 id2 TFAP4 TFAP4 TCF4 TCF4 tcf15 tcf15 usf2 usf2 tcf3 tcf3 usf1 usf1 LOC101165413 LOC101165413 hes6 hes6 figla figla HAND1 HAND1 LOC101158436 LOC101158436 myog myog LOC100049436 LOC100049436 myf5 myf5 myf6 myf6 LOC101165973 LOC101165973 ascl1 ascl1 LOC100049437 LOC100049437 MAX MAX LOC101163780 LOC101163780 NPAS3 NPAS3 Twist2 Twist2 H2MV41_ORYLA H2MV41_ORYLA LOC101170061 LOC101170061 LOC101170311 LOC101170311 LOC101159313 LOC101159313 LOC101166208 LOC101166208 LOC101161695 LOC101161695 neurog1 neurog1 LOC101170445 LOC101170445 hand2 hand2 LOC101167928 LOC101167928 id3 id3 LOC101175327 LOC101175327 dec1b dec1b neurod1 neurod1 LOC101171962 LOC101171962 Tcfl5 Tcfl5 ncoa1 ncoa1 usf3 usf3 epas1 epas1 LOC101169991 LOC101169991 tcf21 tcf21 dec1a dec1a LOC101174995 LOC101174995 hes3 hes3 LOC100049440 LOC100049440 c-myc17 c-myc17 hif1a hif1a ENSORLP00000032832 ENSORLP00000032832 mxd1 mxd1 LOC101164381 LOC101164381 MITF MITF mlx mlx LOC105357454 LOC105357454 sim2 sim2 ENSORLP00000035296 ENSORLP00000035296 EBF1 EBF1 myc myc LOC101166810 LOC101166810 LOC101163732 LOC101163732 atoh8 atoh8 LOC101171768 LOC101171768 tfec tfec TCF24 TCF24 HES2-2 HES2-2 LOC101155312 LOC101155312 LOC101172048 LOC101172048 ENSORLP00000041437 ENSORLP00000041437 ENSORLP00000041481 ENSORLP00000041481 mycn mycn LOC101174459 LOC101174459 ENSORLP00000043117 ENSORLP00000043117 LOC101174799 LOC101174799 hey1 hey1 LOC101175405 LOC101175405 ahrr ahrr ENSORLP00000045842 ENSORLP00000045842 myod1 myod1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101174729Aryl hydrocarbon receptor 2. (904 aa)
ahrUncharacterized protein. (879 aa)
tal2T-cell acute lymphocytic leukemia 2. (112 aa)
npas4Neuronal PAS domain protein 4a. (930 aa)
LOC101165163Hypoxia inducible factor 1 subunit alpha, like. (652 aa)
LOC101162314Inhibitor of DNA binding 4. (138 aa)
LOC101162699MAX network transcriptional repressor b. (610 aa)
LOC105356519Basic helix-loop-helix family, member a15. (187 aa)
NEUROD2Neurogenic differentiation factor. (355 aa)
LOC101172602Endothelial PAS domain protein 1b. (861 aa)
LOC101175459BHLH domain-containing protein. (457 aa)
LOC100049435Hairy-related 12. (145 aa)
LOC100049439Hairy-related 4, tandem duplicate 2. (166 aa)
ferd3lFer3-like bHLH transcription factor. (71 aa)
twist1Twist family bHLH transcription factor 1a. (185 aa)
HES2Hes family bHLH transcription factor 2, tandem duplicate 1. (201 aa)
LOC101165450Clock circadian regulator b. (904 aa)
atoh1Atonal bHLH transcription factor 1a. (351 aa)
LOC100820722Transcription factor 3b. (658 aa)
LOC101161725BHLH domain-containing protein. (497 aa)
hes4Uncharacterized protein. (291 aa)
LOC101175434Nuclear receptor coactivator. (1496 aa)
ebf3EBF transcription factor 3a. (548 aa)
MXI1MAX interactor 1, dimerization protein. (304 aa)
mlxipMLX interacting protein. (851 aa)
scxScleraxis bHLH transcription factor a. (214 aa)
LOC101161895EBF transcription factor 2. (568 aa)
mxd4MAX dimerization protein 4. (217 aa)
mxd3MAX dimerization protein 3. (200 aa)
Npas1Neuronal PAS domain protein 1. (310 aa)
twist1-2Basic helix-loop-helix transcription factor twist. (168 aa)
LOC101168209Neuronal differentiation 4. (351 aa)
LOC101162765EBF transcription factor 1. (518 aa)
hes1Her6.1. (277 aa)
mntMAX network transcriptional repressor a. (611 aa)
mscMusculin (activated B-cell factor-1). (166 aa)
ncoa2Nuclear receptor coactivator. (1498 aa)
LOC101163844Uncharacterized protein. (311 aa)
ptf1aPancreas associated transcription factor 1a. (268 aa)
LOC101171533Neuronal differentiation 2. (356 aa)
tcf12Transcription factor 12. (708 aa)
bhlhe22Basic helix-loop-helix family, member e22. (268 aa)
LOC101164660Upstream transcription factor 2, c-fos interacting. (305 aa)
LOC101172430Neuronal PAS domain protein 2. (867 aa)
srebf1Sterol regulatory element binding transcription factor 1. (1159 aa)
ARNTL2Aryl hydrocarbon receptor nuclear translocator like 2. (620 aa)
bhlhe23Basic helix-loop-helix family, member e23. (227 aa)
LOC100049417Hairy-related 5. (175 aa)
hes7BHLH domain-containing protein. (268 aa)
olig2Oligodendrocyte lineage transcription factor 2. (268 aa)
arntAryl hydrocarbon receptor nuclear translocator. (780 aa)
H2M505_ORYLABHLH domain-containing protein. (121 aa)
LOC101174183Aryl hydrocarbon receptor nuclear translocator-like 2. (637 aa)
ASCL4Achaete-scute family bHLH transcription factor 4. (156 aa)
bhlhe41BHLH protein DEC2. (419 aa)
H2M9H6_ORYLAAchaete-scute family bHLH transcription factor 1b. (185 aa)
NCOA3Nuclear receptor coactivator. (1496 aa)
sim1SIM bHLH transcription factor 1. (759 aa)
LOC101156489Nuclear receptor coactivator 3. (1533 aa)
LOC101161879Inhibitor of DNA binding 1, HLH protein. (159 aa)
atoh7Atonal bHLH transcription factor 7. (142 aa)
H2MFW7_ORYLABHLH domain-containing protein. (113 aa)
tfe3Transcription factor binding to IGHM enhancer 3b. (512 aa)
LOC101162828Mesoderm posterior ba. (262 aa)
mespMesoderm posterior aa. (245 aa)
srebf2Sterol regulatory element binding transcription factor 2. (1179 aa)
LOC101164270Mesogenin 1. (136 aa)
id2Inhibitor of DNA binding 2a. (137 aa)
TFAP4Transcription factor AP-4 (activating enhancer binding protein 4). (332 aa)
TCF4Transcription factor 4. (655 aa)
tcf15Transcription factor 15. (178 aa)
usf2BHLH domain-containing protein. (325 aa)
tcf3E2A2 transcription factor. (669 aa)
usf1Upstream transcription factor 1. (346 aa)
LOC101165413Hairy-related 8.2. (198 aa)
hes6Uncharacterized protein. (233 aa)
figlaBHLH domain-containing protein. (200 aa)
HAND1Heart and neural crest derivatives expressed 1. (191 aa)
LOC101158436Transcription factor EB. (511 aa)
myogMyogenin. (248 aa)
LOC100049436Her7. (201 aa)
myf5Myogenic factor. (240 aa)
myf6Myogenic factor 6. (253 aa)
LOC101165973BHLH domain-containing protein. (190 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (178 aa)
LOC100049437Hes family bHLH transcription factor 6. (209 aa)
MAXBHLH domain-containing protein. (157 aa)
LOC101163780Oligodendrocyte transcription factor 4. (258 aa)
NPAS3Neuronal PAS domain protein 3. (924 aa)
Twist2Twist2. (167 aa)
H2MV41_ORYLASi:dkey-34f9.3. (202 aa)
LOC101170061Uncharacterized protein. (866 aa)
LOC101170311Uncharacterized protein. (723 aa)
LOC101159313Aryl hydrocarbon receptor nuclear translocator-like 1a. (602 aa)
LOC101166208IPT/TIG domain-containing protein. (574 aa)
LOC101161695IPT/TIG domain-containing protein. (577 aa)
neurog1Neurogenin 1. (195 aa)
LOC101170445Hes related family bHLH transcription factor with YRPW motif like. (376 aa)
hand2Heart and neural crest derivatives expressed 2. (232 aa)
LOC101167928BHLH domain-containing protein. (361 aa)
id3Inhibitor of DNA binding 3. (118 aa)
LOC101175327Atonal bHLH transcription factor 1b. (229 aa)
dec1bBHLH protein DEC1b. (428 aa)
neurod1Neurogenic differentiation factor. (350 aa)
LOC101171962BHLH domain-containing protein. (2098 aa)
Tcfl5BHLH domain-containing protein. (142 aa)
ncoa1Nuclear receptor coactivator 1. (1385 aa)
usf3Upstream transcription factor family member 3. (2302 aa)
epas1Uncharacterized protein. (404 aa)
LOC101169991Uncharacterized protein. (283 aa)
tcf21Transcription factor 21. (171 aa)
dec1aBHLH protein DEC1a. (400 aa)
LOC101174995Twist3b. (214 aa)
hes3Hairy-related 3. (228 aa)
LOC100049440Her6.2. (231 aa)
c-myc17Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (372 aa)
hif1aHypoxia inducible factor 1 subunit alpha a. (750 aa)
ENSORLP00000032832BHLH domain-containing protein. (199 aa)
mxd1MAX dimerization protein 1. (225 aa)
LOC101164381Max interactor 1, dimerization protein. (278 aa)
MITFMelanocyte inducing transcription factor b. (511 aa)
mlxMAX dimerization protein MLX. (251 aa)
LOC105357454Myogenic factor. (245 aa)
sim2Uncharacterized protein. (683 aa)
ENSORLP00000035296Basic helix-loop-helix family, member a9. (271 aa)
EBF1EBF transcription factor 1. (599 aa)
mycBHLH domain-containing protein. (527 aa)
LOC101166810MYCL proto-oncogene, bHLH transcription factor b. (567 aa)
LOC101163732Microphthalmia-associated transcription factor 2 isoform m. (406 aa)
atoh8BHLH domain-containing protein. (382 aa)
LOC101171768BHLH domain-containing protein. (924 aa)
tfecTranscription factor EC. (534 aa)
TCF24BHLH domain-containing protein. (173 aa)
HES2-2Hes family bHLH transcription factor 2, tandem duplicate 1. (188 aa)
LOC101155312MYCL proto-oncogene, bHLH transcription factor a. (353 aa)
LOC101172048Myc associated factor X. (160 aa)
ENSORLP00000041437BHLH domain-containing protein. (332 aa)
ENSORLP00000041481Oligodendrocyte transcription factor 1. (162 aa)
mycnMYCN proto-oncogene, bHLH transcription factor. (451 aa)
LOC101174459T-cell acute lymphocytic leukemia 1. (394 aa)
ENSORLP00000043117BHLH domain-containing protein. (212 aa)
LOC101174799BHLH domain-containing protein. (450 aa)
hey1Hes-related family bHLH transcription factor with YRPW motif 1. (331 aa)
LOC101175405Transcription factor AP-4 (activating enhancer binding protein 4). (330 aa)
ahrrUncharacterized protein. (690 aa)
ENSORLP00000045842BHLH domain-containing protein. (270 aa)
myod1Myogenic factor. (297 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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