STRINGSTRING
NFIX NFIX nfic nfic LOC101159109 LOC101159109 LOC101170165 LOC101170165 nfia nfia smad9 smad9 LOC101169523 LOC101169523 SMAD4 SMAD4 NFIB NFIB smad3 smad3 smad6 smad6 smad1 smad1 smad7 smad7 smad2 smad2 LOC101164563 LOC101164563 LOC101160003 LOC101160003 LOC101173916 LOC101173916 LOC101163504 LOC101163504
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NFIXNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (611 aa)
nficNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (512 aa)
LOC101159109Mothers against decapentaplegic homolog. (467 aa)
LOC101170165Mothers against decapentaplegic homolog. (499 aa)
nfiaNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (552 aa)
smad9Mothers against decapentaplegic homolog. (467 aa)
LOC101169523Mothers against decapentaplegic homolog. (425 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (560 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
smad6Mothers against decapentaplegic homolog. (488 aa)
smad1Mothers against decapentaplegic homolog. (471 aa)
smad7Mothers against decapentaplegic homolog. (375 aa)
smad2Mothers against decapentaplegic homolog. (473 aa)
LOC101164563Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (557 aa)
LOC101160003Mothers against decapentaplegic homolog. (464 aa)
LOC101173916Mothers against decapentaplegic homolog. (538 aa)
LOC101163504Mothers against decapentaplegic homolog. (528 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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