STRINGSTRING
irx5 irx5 LOC101155782 LOC101155782 LOC101157469 LOC101157469 irx3 irx3 LOC101162949 LOC101162949 LOC101160967 LOC101160967
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
irx5Iroquois homeobox 5a. (448 aa)
LOC101155782Iroquois homeobox 1b. (452 aa)
LOC101157469Iroquois homeobox 4b. (390 aa)
irx3Iroquois homeobox 3a. (423 aa)
LOC101162949Iroquois homeobox 1a. (500 aa)
LOC101160967Iroquois homeobox 7. (312 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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