107 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101163644	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (388 aa)
	LOC101155449	Uncharacterized protein. (920 aa)
	LOC101155859	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	pard3	Par-3 family cell polarity regulator alpha, b. (1389 aa)
	LOC101169523	Mothers against decapentaplegic homolog. (425 aa)
	LOC101160197	E1A binding protein p300 a. (2781 aa)
	LOC105354522	Rac family small GTPase 3b. (197 aa)
	ptprf	Protein tyrosine phosphatase receptor type Fa. (1802 aa)
	LOC101169984	Receptor protein-tyrosine kinase. (1191 aa)
	LOC101171502	Uncharacterized protein. (768 aa)
	SMAD4	Mothers against decapentaplegic homolog. (510 aa)
	LOC101174230	Receptor protein-tyrosine kinase. (1292 aa)
	LOC101164658	Uncharacterized protein. (242 aa)
	LOC101160681	WH2 domain-containing protein. (450 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	LOC101156432	Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
	LOC101175345	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	lef1	Lymphoid enhancer-binding factor 1. (379 aa)
	ctnna1	Catenin (cadherin-associated protein), alpha 1. (929 aa)
	LOC101169609	BAI1-associated protein 2a. (555 aa)
	LOC101155194	Uncharacterized protein. (193 aa)
	adcy9	CREB binding protein b. (2423 aa)
	LOC101165595	Zgc:109889. (553 aa)
	vcl	Vinculin b. (1066 aa)
	wasf3	WASP family member 3b. (486 aa)
	LOC101170697	Nectin cell adhesion molecule 3b. (587 aa)
	LOC101160236	Snail family zinc finger 1b. (266 aa)
	LOC101168921	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
	LOC101170569	Uncharacterized protein. (821 aa)
	wasf2	WASP family member 2. (471 aa)
	LOC101161003	Zgc:158689. (663 aa)
	YES1	Tyrosine-protein kinase. (550 aa)
	tcf7l1	HMG box domain-containing protein. (574 aa)
	LOC101159747	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	LOC101170653	Uncharacterized protein. (432 aa)
	CDC42	Cell division cycle 42. (191 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (582 aa)
	nectin2	Si:ch73-22o12.1. (532 aa)
	was	WASP actin nucleation promoting factor a. (561 aa)
	fgfr1	Fibroblast growth factor receptor. (833 aa)
	ptpn1	Tyrosine-protein phosphatase non-receptor type. (432 aa)
	nlk	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (527 aa)
	snai2	Snail family zinc finger 2. (260 aa)
	egfr	Receptor protein-tyrosine kinase. (1185 aa)
	LOC101161755	Afadin- and alpha-actinin-binding protein; Belongs to an adhesion system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Involved in cell movement (By similarity). Acts as a centrosome maturation factor, probably by maintaining the integrity of the pericentriolar material and proper microtubule nucleation at mitotic spindle poles. (594 aa)
	LOC101162321	Tyrosine-protein kinase. (547 aa)
	LOC101173444	Uncharacterized protein. (193 aa)
	LOC101169916	Uncharacterized protein. (1868 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1403 aa)
	LOC101169589	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (840 aa)
	farp2	FERM, RhoGEF and pleckstrin domain protein 2. (1058 aa)
	LOC101163392	CREB binding protein a. (2409 aa)
	map3k7	Mitogen-activated protein kinase kinase kinase 7. (595 aa)
	LOC101160233	Tight junction protein 1b; Belongs to the MAGUK family. (1856 aa)
	LOC105357330	Cadherin 3. (752 aa)
	LOC101172858	Uncharacterized protein. (435 aa)
	BAIAP2	BAI1 associated protein 2. (577 aa)
	LOC101174454	Uncharacterized protein. (191 aa)
	LOC101166369	Tight junction protein 1a; Belongs to the MAGUK family. (1748 aa)
	ctnna2	Catenin (cadherin-associated protein), alpha 2. (905 aa)
	LOC101163560	Tyrosine-protein kinase receptor. (1405 aa)
	LOC101158607	Uncharacterized protein. (193 aa)
	LOC101173916	Mothers against decapentaplegic homolog. (538 aa)
	LOC101157019	Tyrosine-protein kinase. (537 aa)
	LOC101173298	Tyrosine-protein kinase receptor. (1408 aa)
	LOC111948794	Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins. (858 aa)
	LOC111948314	HMG box domain-containing protein. (548 aa)
	iqgap1	IQ motif containing GTPase activating protein 1. (1661 aa)
	PTPRM	Uncharacterized protein. (1041 aa)
	LOC101173666	Uncharacterized protein. (432 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	LOC110017439	Uncharacterized protein. (356 aa)
	PARD3	Par-3 family cell polarity regulator. (1373 aa)
	actn1	Actinin, alpha 1. (918 aa)
	LOC101168870	E1A binding protein p300 b. (2760 aa)
	LOC105358576	Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins. (873 aa)
	LOC105356840	Uncharacterized protein. (330 aa)
	LOC101159016	Uncharacterized protein. (192 aa)
	LOC101164400	Uncharacterized protein. (191 aa)
	acp1	LMWPc domain-containing protein. (158 aa)
	LOC101167563	Uncharacterized protein. (519 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	lmo7	LIM domain 7a. (1357 aa)
	tcf7	Transcription factor 7. (536 aa)
	afdn	Afadin, adherens junction formation factor a. (1700 aa)
	LOC101162905	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	LOC101175028	Uncharacterized protein. (192 aa)
	LOC101172101	Vinculin a. (1135 aa)
	LOC101163549	Uncharacterized protein. (192 aa)
	LOC101167618	Uncharacterized protein. (193 aa)
	LOC101168711	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (475 aa)
	LOC101160890	Uncharacterized protein. (1572 aa)
	wasf1	WASP family member 1. (583 aa)
	LOC101174785	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (587 aa)
	LOC101167011	Tyrosine-protein kinase. (526 aa)
	wasl	Uncharacterized protein. (519 aa)
	TGFBR2	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (540 aa)
	LOC101166254	Tyrosine-protein kinase receptor. (1387 aa)
	LOC101171060	Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins. (833 aa)
	LOC105358571	Uncharacterized protein. (364 aa)
	PTPRB	Protein tyrosine phosphatase receptor type B. (2056 aa)
	ctnnd1	Uncharacterized protein. (918 aa)
	LOC101155126	Fibroblast growth factor receptor. (740 aa)
	LOC101163504	Mothers against decapentaplegic homolog. (528 aa)
	ENSORLP00000045554	Uncharacterized protein. (269 aa)
	LOC101172063	LIM domain 7b. (1344 aa)
	LOC101157208	Snail family zinc finger 1a. (256 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAIAP2	CDC42	ENSORLP00000028846	ENSORLP00000015084	BAI1 associated protein 2.	Cell division cycle 42.	0.844
BAIAP2	LOC101159016	ENSORLP00000028846	ENSORLP00000034283	BAI1 associated protein 2.	Uncharacterized protein.	0.978
BAIAP2	LOC101160681	ENSORLP00000028846	ENSORLP00000008352	BAI1 associated protein 2.	WH2 domain-containing protein.	0.920
BAIAP2	LOC101161003	ENSORLP00000028846	ENSORLP00000013955	BAI1 associated protein 2.	Zgc:158689.	0.935
BAIAP2	LOC101163549	ENSORLP00000028846	ENSORLP00000040285	BAI1 associated protein 2.	Uncharacterized protein.	0.964
BAIAP2	LOC101164400	ENSORLP00000028846	ENSORLP00000034529	BAI1 associated protein 2.	Uncharacterized protein.	0.844
BAIAP2	LOC101164658	ENSORLP00000028846	ENSORLP00000007959	BAI1 associated protein 2.	Uncharacterized protein.	0.779
BAIAP2	LOC101165595	ENSORLP00000028846	ENSORLP00000010598	BAI1 associated protein 2.	Zgc:109889.	0.920
BAIAP2	LOC101168921	ENSORLP00000028846	ENSORLP00000011676	BAI1 associated protein 2.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.933
BAIAP2	LOC101169609	ENSORLP00000028846	ENSORLP00000009348	BAI1 associated protein 2.	BAI1-associated protein 2a.	0.901
BAIAP2	LOC101174454	ENSORLP00000028846	ENSORLP00000028896	BAI1 associated protein 2.	Uncharacterized protein.	0.779
BAIAP2	LOC101175028	ENSORLP00000028846	ENSORLP00000039764	BAI1 associated protein 2.	Uncharacterized protein.	0.978
BAIAP2	LOC105354522	ENSORLP00000028846	ENSORLP00000003336	BAI1 associated protein 2.	Rac family small GTPase 3b.	0.964
BAIAP2	was	ENSORLP00000028846	ENSORLP00000017737	BAI1 associated protein 2.	WASP actin nucleation promoting factor a.	0.671
BAIAP2	wasf1	ENSORLP00000028846	ENSORLP00000041169	BAI1 associated protein 2.	WASP family member 1.	0.948
BAIAP2	wasf2	ENSORLP00000028846	ENSORLP00000013868	BAI1 associated protein 2.	WASP family member 2.	0.973
BAIAP2	wasf3	ENSORLP00000028846	ENSORLP00000011104	BAI1 associated protein 2.	WASP family member 3b.	0.920
BAIAP2	wasl	ENSORLP00000028846	ENSORLP00000041551	BAI1 associated protein 2.	Uncharacterized protein.	0.671
CDC42	BAIAP2	ENSORLP00000015084	ENSORLP00000028846	Cell division cycle 42.	BAI1 associated protein 2.	0.844
CDC42	LOC101155194	ENSORLP00000015084	ENSORLP00000010127	Cell division cycle 42.	Uncharacterized protein.	0.459