STRINGSTRING
sf3b5 sf3b5 sf3b4 sf3b4 sf3b6 sf3b6 sf3b2 sf3b2 sf3b3 sf3b3 phf5a phf5a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
sf3b4Splicing factor 3b, subunit 4. (400 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
sf3b2Splicing factor 3b, subunit 2. (880 aa)
sf3b3Splicing factor 3b, subunit 3. (1195 aa)
phf5aPHD finger protein 5A. (110 aa)
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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