STRINGSTRING
syf2 syf2 srrm1 srrm1 ENSAPOP00000000298 ENSAPOP00000000298 yju2 yju2 cwf19l2 cwf19l2 cwc15 cwc15 bcas2 bcas2 xab2 xab2 gpkow gpkow snrpa1 snrpa1 ppwd1 ppwd1 cwc27 cwc27 plrg1 plrg1 scnm1 scnm1 cdc40 cdc40 LOC110955119 LOC110955119 dhx16 dhx16 ZNF830 ZNF830 rbm22 rbm22 dhx38 dhx38 ppil3 ppil3 ppil2 ppil2 dhx34 dhx34 WDR70 WDR70 bud13 bud13 dhx35 dhx35 rnf113a rnf113a dhx8 dhx8 ALYREF ALYREF ppil1 ppil1 armc7 armc7 DHX15 DHX15 snw1 snw1 ppil6 ppil6 prpf18 prpf18 ppie ppie LOC110962983 LOC110962983 cript cript cwc22 cwc22 ppil4 ppil4 crnkl1 crnkl1 cdc5l cdc5l SRRM3 SRRM3 LOC110960443 LOC110960443 aqr aqr ENSAPOP00000026967 ENSAPOP00000026967 tfip11 tfip11 ENSAPOP00000027184 ENSAPOP00000027184 ENSAPOP00000027245 ENSAPOP00000027245 slu7 slu7 WDR25 WDR25 ccdc12 ccdc12 prpf19 prpf19 rbmx2 rbmx2 bud31 bud31 rbm48 rbm48 ctnnbl1 ctnnbl1 SNIP1 SNIP1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
srrm1Serine/arginine repetitive matrix 1. (864 aa)
ENSAPOP00000000298Cir_N domain-containing protein. (64 aa)
yju2YJU2 splicing factor homolog. (343 aa)
cwf19l2CWF19 like cell cycle control factor 2. (936 aa)
cwc15CWC15 spliceosome associated protein homolog. (253 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
xab2XPA binding protein 2. (850 aa)
gpkowG patch domain and KOW motifs. (509 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (239 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)
cwc27CWC27 spliceosome associated cyclophilin. (480 aa)
plrg1Pleiotropic regulator 1. (513 aa)
scnm1Sodium channel modifier 1. (296 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (448 aa)
LOC110955119Serine/arginine repetitive matrix 2. (1338 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1016 aa)
ZNF830Zinc finger protein 830. (344 aa)
rbm22RNA binding motif protein 22. (427 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1253 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (504 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1145 aa)
WDR70WD repeat domain 70. (645 aa)
bud13BUD13 homolog. (529 aa)
dhx35DEAH-box helicase 35. (713 aa)
rnf113aRing finger protein 113A. (322 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1212 aa)
ALYREFAly/REF export factor. (272 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
armc7Armadillo repeat containing 7. (191 aa)
DHX15DEAH-box helicase 15. (763 aa)
snw1SNW domain containing 1. (536 aa)
ppil6Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (256 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
LOC110962983Src homology 2 domain containing transforming protein D, a. (414 aa)
criptCysteine-rich PDZ-binding protein. (102 aa)
cwc22CWC22 spliceosome associated protein homolog. (869 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (474 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (760 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (812 aa)
SRRM3Serine/arginine repetitive matrix 3. (646 aa)
LOC110960443Si:dkey-93h22.8. (1161 aa)
aqrAquarius intron-binding spliceosomal factor. (1468 aa)
ENSAPOP00000026967DUF1716 domain-containing protein. (202 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (834 aa)
ENSAPOP00000027184Uncharacterized protein. (85 aa)
ENSAPOP00000027245annotation not available (85 aa)
slu7SLU7 homolog, splicing factor. (580 aa)
WDR25WD repeat domain 25. (514 aa)
ccdc12Coiled-coil domain containing 12. (272 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
rbmx2RNA binding motif protein X-linked 2. (273 aa)
bud31BUD31 homolog. (144 aa)
rbm48RNA binding motif protein 48. (360 aa)
ctnnbl1Catenin, beta like 1. (348 aa)
SNIP1Smad nuclear interacting protein 1. (361 aa)
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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