(11 nodes) AP-3 adaptor complex binding, and Eye pigmentation network (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110961824	RAB38b, member of RAS oncogene family. (218 aa)
	rab23	RAB23, member RAS oncogene family. (235 aa)
	LOC110957983	RAB32b, member RAS oncogene family. (210 aa)
	LOC110958423	Uncharacterized protein. (165 aa)
	LOC110967386	Ras-related protein Rab-32-like. (210 aa)
	RAB38	RAB38, member RAS oncogene family. (211 aa)
	hps4	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (618 aa)
	ptar1	Protein prenyltransferase alpha subunit repeat containing 1. (470 aa)
	rab32	RAB32a, member RAS oncogene family. (213 aa)
	hps1	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1. (670 aa)
	LOC110945474	Ras-related protein Rab-32-like. (210 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110945474	hps1	ENSAPOP00000033618	ENSAPOP00000032252	Ras-related protein Rab-32-like.	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	0.603
LOC110945474	hps4	ENSAPOP00000033618	ENSAPOP00000019644	Ras-related protein Rab-32-like.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.461
LOC110945474	ptar1	ENSAPOP00000033618	ENSAPOP00000031218	Ras-related protein Rab-32-like.	Protein prenyltransferase alpha subunit repeat containing 1.	0.674
LOC110957983	hps1	ENSAPOP00000009273	ENSAPOP00000032252	RAB32b, member RAS oncogene family.	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	0.603
LOC110957983	hps4	ENSAPOP00000009273	ENSAPOP00000019644	RAB32b, member RAS oncogene family.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.461
LOC110957983	ptar1	ENSAPOP00000009273	ENSAPOP00000031218	RAB32b, member RAS oncogene family.	Protein prenyltransferase alpha subunit repeat containing 1.	0.674
LOC110958423	ptar1	ENSAPOP00000011812	ENSAPOP00000031218	Uncharacterized protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.831
LOC110961824	hps1	ENSAPOP00000001885	ENSAPOP00000032252	RAB38b, member of RAS oncogene family.	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	0.603
LOC110961824	hps4	ENSAPOP00000001885	ENSAPOP00000019644	RAB38b, member of RAS oncogene family.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.461
LOC110961824	ptar1	ENSAPOP00000001885	ENSAPOP00000031218	RAB38b, member of RAS oncogene family.	Protein prenyltransferase alpha subunit repeat containing 1.	0.674
LOC110967386	hps1	ENSAPOP00000012818	ENSAPOP00000032252	Ras-related protein Rab-32-like.	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	0.603
LOC110967386	hps4	ENSAPOP00000012818	ENSAPOP00000019644	Ras-related protein Rab-32-like.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.461
LOC110967386	ptar1	ENSAPOP00000012818	ENSAPOP00000031218	Ras-related protein Rab-32-like.	Protein prenyltransferase alpha subunit repeat containing 1.	0.674
RAB38	hps1	ENSAPOP00000015714	ENSAPOP00000032252	RAB38, member RAS oncogene family.	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	0.603
RAB38	hps4	ENSAPOP00000015714	ENSAPOP00000019644	RAB38, member RAS oncogene family.	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.	0.461
RAB38	ptar1	ENSAPOP00000015714	ENSAPOP00000031218	RAB38, member RAS oncogene family.	Protein prenyltransferase alpha subunit repeat containing 1.	0.674
hps1	LOC110945474	ENSAPOP00000032252	ENSAPOP00000033618	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	Ras-related protein Rab-32-like.	0.603
hps1	LOC110957983	ENSAPOP00000032252	ENSAPOP00000009273	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	RAB32b, member RAS oncogene family.	0.603
hps1	LOC110961824	ENSAPOP00000032252	ENSAPOP00000001885	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	RAB38b, member of RAS oncogene family.	0.603
hps1	LOC110967386	ENSAPOP00000032252	ENSAPOP00000012818	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.	Ras-related protein Rab-32-like.	0.603