49 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HDAC1	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (490 aa)
	znf217	Zinc finger protein 217. (964 aa)
	LOC110960567	Spalt-like transcription factor 3b. (1207 aa)
	LOC110955897	RE1-silencing transcription factor. (913 aa)
	LOC110953527	GATA zinc finger domain containing 2A. (745 aa)
	hmg20b	High mobility group 20B. (294 aa)
	LOC110949310	Methyl-CpG binding domain protein 3a. (297 aa)
	gatad2b	GATA zinc finger domain containing 2B. (652 aa)
	mta1	Metastasis associated 1. (619 aa)
	PHF21B	PHD finger protein 21B. (389 aa)
	LOC110962301	BRMS1 like transcriptional repressor b. (324 aa)
	ENSAPOP00000007197	Integrase catalytic domain-containing protein. (337 aa)
	HMG20A	High mobility group 20A. (288 aa)
	suds3	SDS3 homolog, SIN3A corepressor complex component. (318 aa)
	ENSAPOP00000009018	Integrase catalytic domain-containing protein. (397 aa)
	ENSAPOP00000009792	Uncharacterized protein. (161 aa)
	LOC110959127	Methyl-CpG binding domain protein 2. (264 aa)
	ENSAPOP00000011034	CHDCT2 domain-containing protein. (239 aa)
	ENSAPOP00000011062	PHD-type domain-containing protein. (131 aa)
	kdm1a	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (866 aa)
	LOC110962630	High mobility group protein 20A-like. (288 aa)
	LOC110956135	Hist_deacetyl domain-containing protein. (491 aa)
	sin3a	SIN3 transcription regulator family member Aa. (1274 aa)
	hdac9	Histone deacetylase 9b. (586 aa)
	sin3b	SIN3 transcription regulator family member B. (1274 aa)
	mbd4	Methyl-CpG binding domain protein 4. (475 aa)
	sall1	Spalt-like transcription factor 1a. (1306 aa)
	brms1	BRMS1 transcriptional repressor and anoikis regulator. (274 aa)
	LOC110948364	Metastasis associated 1 family, member 3. (700 aa)
	ing1	Inhibitor of growth protein. (306 aa)
	LOC110954112	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
	gatad2a	GATA zinc finger domain containing 2Ab. (649 aa)
	LOC110967139	Uncharacterized protein. (242 aa)
	chd3	Chromodomain helicase DNA binding protein 3. (1648 aa)
	wdr73	WD repeat domain 73. (388 aa)
	hdac8	Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (378 aa)
	rcor1	REST corepressor 1. (459 aa)
	ENSAPOP00000025352	Uncharacterized protein. (82 aa)
	LOC110971396	Chromodomain helicase DNA binding protein 4a. (1807 aa)
	brms1l	Uncharacterized protein. (262 aa)
	rcor2	REST corepressor 2. (348 aa)
	mta2	Metastasis associated 1 family, member 2. (663 aa)
	LOC110962055	REST corepressor 3. (505 aa)
	aire	Autoimmune regulator. (423 aa)
	arid4a	AT rich interactive domain 4A (RBP1-like). (1386 aa)
	HDAC2	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (446 aa)
	chd5	Uncharacterized protein. (1858 aa)
	LOC110972463	SDS3 homolog, SIN3A corepressor complex component. (318 aa)
	sap30l	Sap30-like. (217 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000007197	ENSAPOP00000009018	ENSAPOP00000007197	ENSAPOP00000009018	Integrase catalytic domain-containing protein.	Integrase catalytic domain-containing protein.	0.411
ENSAPOP00000007197	ENSAPOP00000009792	ENSAPOP00000007197	ENSAPOP00000009792	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.719
ENSAPOP00000007197	ENSAPOP00000011034	ENSAPOP00000007197	ENSAPOP00000011034	Integrase catalytic domain-containing protein.	CHDCT2 domain-containing protein.	0.777
ENSAPOP00000007197	ENSAPOP00000011062	ENSAPOP00000007197	ENSAPOP00000011062	Integrase catalytic domain-containing protein.	PHD-type domain-containing protein.	0.777
ENSAPOP00000007197	ENSAPOP00000025352	ENSAPOP00000007197	ENSAPOP00000025352	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.777
ENSAPOP00000007197	HDAC1	ENSAPOP00000007197	ENSAPOP00000000024	Integrase catalytic domain-containing protein.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.882
ENSAPOP00000007197	HDAC2	ENSAPOP00000007197	ENSAPOP00000031685	Integrase catalytic domain-containing protein.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.882
ENSAPOP00000007197	HMG20A	ENSAPOP00000007197	ENSAPOP00000008410	Integrase catalytic domain-containing protein.	High mobility group 20A.	0.495
ENSAPOP00000007197	LOC110948364	ENSAPOP00000007197	ENSAPOP00000021374	Integrase catalytic domain-containing protein.	Metastasis associated 1 family, member 3.	0.837
ENSAPOP00000007197	LOC110949310	ENSAPOP00000007197	ENSAPOP00000003518	Integrase catalytic domain-containing protein.	Methyl-CpG binding domain protein 3a.	0.738
ENSAPOP00000007197	LOC110954112	ENSAPOP00000007197	ENSAPOP00000021868	Integrase catalytic domain-containing protein.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.882
ENSAPOP00000007197	LOC110955897	ENSAPOP00000007197	ENSAPOP00000002852	Integrase catalytic domain-containing protein.	RE1-silencing transcription factor.	0.421
ENSAPOP00000007197	LOC110956135	ENSAPOP00000007197	ENSAPOP00000013072	Integrase catalytic domain-containing protein.	Hist_deacetyl domain-containing protein.	0.719
ENSAPOP00000007197	LOC110959127	ENSAPOP00000007197	ENSAPOP00000010203	Integrase catalytic domain-containing protein.	Methyl-CpG binding domain protein 2.	0.738
ENSAPOP00000007197	LOC110960567	ENSAPOP00000007197	ENSAPOP00000002832	Integrase catalytic domain-containing protein.	Spalt-like transcription factor 3b.	0.626
ENSAPOP00000007197	LOC110962055	ENSAPOP00000007197	ENSAPOP00000028655	Integrase catalytic domain-containing protein.	REST corepressor 3.	0.543
ENSAPOP00000007197	LOC110962301	ENSAPOP00000007197	ENSAPOP00000004783	Integrase catalytic domain-containing protein.	BRMS1 like transcriptional repressor b.	0.431
ENSAPOP00000007197	LOC110962630	ENSAPOP00000007197	ENSAPOP00000011852	Integrase catalytic domain-containing protein.	High mobility group protein 20A-like.	0.495
ENSAPOP00000007197	LOC110967139	ENSAPOP00000007197	ENSAPOP00000023197	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.738
ENSAPOP00000007197	LOC110971396	ENSAPOP00000007197	ENSAPOP00000025380	Integrase catalytic domain-containing protein.	Chromodomain helicase DNA binding protein 4a.	0.777