(36 nodes) Phagocytic vesicle membrane network (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110958058	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (241 aa)
	TLR2	Toll like receptor 2. (800 aa)
	LOC110962757	Rab interacting lysosomal protein. (427 aa)
	LOC110951599	Synaptotagmin VIIb. (677 aa)
	LOC110957983	RAB32b, member RAS oncogene family. (210 aa)
	ocrl	OCRL inositol polyphosphate-5-phosphatase. (950 aa)
	LOC110970507	Uncharacterized protein. (562 aa)
	LOC110967386	Ras-related protein Rab-32-like. (210 aa)
	LOC110949179	Uncharacterized protein. (207 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	RAB38	RAB38, member RAS oncogene family. (211 aa)
	ENSAPOP00000015783	TIR domain-containing protein. (190 aa)
	pip4p2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (282 aa)
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (219 aa)
	RAB9A	RAB9A, member RAS oncogene family. (206 aa)
	LOC110955289	RAB7a, member RAS oncogene family. (207 aa)
	lamp1	Lysosomal associated membrane protein 1a. (415 aa)
	LOC110969648	TIR domain-containing protein; Belongs to the Toll-like receptor family. (827 aa)
	inpp5b	Inositol polyphosphate-5-phosphatase B. (905 aa)
	ENSAPOP00000033897	TIR domain-containing protein. (149 aa)
	LOC110945474	Ras-related protein Rab-32-like. (210 aa)
	rab32	RAB32a, member RAS oncogene family. (213 aa)
	LOC110953747	Synaptotagmin VIIa. (770 aa)
	LOC110945624	Toll-like receptor 2 type-1. (865 aa)
	LOC110945628	Toll-like receptor 18. (865 aa)
	tlr1	Toll-like receptor 1. (802 aa)
	LOC110968015	Zgc:162171. (225 aa)
	pip4p1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (263 aa)
	lamp2	Lysosomal-associated membrane protein 2. (404 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	ENSAPOP00000024659	RAB9B, member RAS oncogene family. (226 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (1970 aa)
	LOC110954040	Si:ch73-234b20.5. (103 aa)
	LOC110970724	RAB38c, member of RAS oncogene family. (207 aa)
	LOC110961824	RAB38b, member of RAS oncogene family. (218 aa)
	ENSAPOP00000004017	Uncharacterized protein. (218 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000004017	ENSAPOP00000024659	ENSAPOP00000004017	ENSAPOP00000024659	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.895
ENSAPOP00000004017	LOC110949179	ENSAPOP00000004017	ENSAPOP00000013296	Uncharacterized protein.	Uncharacterized protein.	0.566
ENSAPOP00000004017	LOC110955289	ENSAPOP00000004017	ENSAPOP00000001316	Uncharacterized protein.	RAB7a, member RAS oncogene family.	0.566
ENSAPOP00000004017	LOC110962757	ENSAPOP00000004017	ENSAPOP00000008043	Uncharacterized protein.	Rab interacting lysosomal protein.	0.605
ENSAPOP00000004017	RAB31	ENSAPOP00000004017	ENSAPOP00000013391	Uncharacterized protein.	RAB31, member RAS oncogene family.	0.694
ENSAPOP00000004017	RAB9A	ENSAPOP00000004017	ENSAPOP00000018582	Uncharacterized protein.	RAB9A, member RAS oncogene family.	0.894
ENSAPOP00000004017	rab22a	ENSAPOP00000004017	ENSAPOP00000027205	Uncharacterized protein.	RAB22A, member RAS oncogene family.	0.691
ENSAPOP00000015783	LOC110945624	ENSAPOP00000015783	ENSAPOP00000030814	TIR domain-containing protein.	Toll-like receptor 2 type-1.	0.618
ENSAPOP00000015783	LOC110945628	ENSAPOP00000015783	ENSAPOP00000030747	TIR domain-containing protein.	Toll-like receptor 18.	0.618
ENSAPOP00000015783	LOC110969648	ENSAPOP00000015783	ENSAPOP00000034835	TIR domain-containing protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.618
ENSAPOP00000015783	LOC110970507	ENSAPOP00000015783	ENSAPOP00000010556	TIR domain-containing protein.	Uncharacterized protein.	0.793
ENSAPOP00000015783	TLR2	ENSAPOP00000015783	ENSAPOP00000007520	TIR domain-containing protein.	Toll like receptor 2.	0.793
ENSAPOP00000024659	ENSAPOP00000004017	ENSAPOP00000024659	ENSAPOP00000004017	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.895
ENSAPOP00000024659	LOC110949179	ENSAPOP00000024659	ENSAPOP00000013296	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.563
ENSAPOP00000024659	LOC110955289	ENSAPOP00000024659	ENSAPOP00000001316	RAB9B, member RAS oncogene family.	RAB7a, member RAS oncogene family.	0.563
ENSAPOP00000024659	LOC110962757	ENSAPOP00000024659	ENSAPOP00000008043	RAB9B, member RAS oncogene family.	Rab interacting lysosomal protein.	0.605
ENSAPOP00000024659	RAB31	ENSAPOP00000024659	ENSAPOP00000013391	RAB9B, member RAS oncogene family.	RAB31, member RAS oncogene family.	0.692
ENSAPOP00000024659	RAB9A	ENSAPOP00000024659	ENSAPOP00000018582	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.894
ENSAPOP00000024659	rab22a	ENSAPOP00000024659	ENSAPOP00000027205	RAB9B, member RAS oncogene family.	RAB22A, member RAS oncogene family.	0.693
ENSAPOP00000033897	LOC110945624	ENSAPOP00000033897	ENSAPOP00000030814	TIR domain-containing protein.	Toll-like receptor 2 type-1.	0.618