11 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110950365	ADAM metallopeptidase domain 10b. (792 aa)
	LOC110963971	Metalloendopeptidase. (630 aa)
	ace	Angiotensin-converting enzyme. (1287 aa)
	CPQ	Carboxypeptidase Q. (487 aa)
	ENSAPOP00000021394	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (369 aa)
	LOC110955764	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (370 aa)
	LOC110959590	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (441 aa)
	LOC110967345	Zgc:114181. (494 aa)
	cndp2	Carnosine dipeptidase 2. (474 aa)
	adam10	Uncharacterized protein. (755 aa)
	LOC110963979	Meprin A subunit. (717 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110959590	LOC110967345	ENSAPOP00000016162	ENSAPOP00000014315	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.	Zgc:114181.	0.419
LOC110959590	cndp2	ENSAPOP00000016162	ENSAPOP00000014014	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.	Carnosine dipeptidase 2.	0.413
LOC110963971	ace	ENSAPOP00000025937	ENSAPOP00000024084	Metalloendopeptidase.	Angiotensin-converting enzyme.	0.729
LOC110963979	ace	ENSAPOP00000007451	ENSAPOP00000024084	Meprin A subunit.	Angiotensin-converting enzyme.	0.729
LOC110967345	LOC110959590	ENSAPOP00000014315	ENSAPOP00000016162	Zgc:114181.	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.	0.419
LOC110967345	cndp2	ENSAPOP00000014315	ENSAPOP00000014014	Zgc:114181.	Carnosine dipeptidase 2.	0.825
ace	LOC110963971	ENSAPOP00000024084	ENSAPOP00000025937	Angiotensin-converting enzyme.	Metalloendopeptidase.	0.729
ace	LOC110963979	ENSAPOP00000024084	ENSAPOP00000007451	Angiotensin-converting enzyme.	Meprin A subunit.	0.729
cndp2	LOC110959590	ENSAPOP00000014014	ENSAPOP00000016162	Carnosine dipeptidase 2.	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.	0.413
cndp2	LOC110967345	ENSAPOP00000014014	ENSAPOP00000014315	Carnosine dipeptidase 2.	Zgc:114181.	0.825