30 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pde10a	Phosphodiesterase. (833 aa)
	LOC110957080	Phosphodiesterase. (772 aa)
	ENSAPOP00000032537	Phosphodiesterase 5A, cGMP-specific, a. (179 aa)
	pde7a	Phosphodiesterase. (520 aa)
	pde6a	Phosphodiesterase. (862 aa)
	LOC110951428	Phosphodiesterase. (940 aa)
	pde8b	Phosphodiesterase. (870 aa)
	pde5a	Phosphodiesterase. (882 aa)
	pde6c	Phosphodiesterase. (856 aa)
	LOC110952687	Phosphodiesterase. (672 aa)
	LOC110970828	Phosphodiesterase. (517 aa)
	LOC110962907	Phosphodiesterase. (519 aa)
	pde8a	Phosphodiesterase. (818 aa)
	LOC110959353	Phosphodiesterase. (842 aa)
	PDE2A	Phosphodiesterase. (955 aa)
	LOC110950708	Phosphodiesterase. (736 aa)
	LOC110950756	Phosphodiesterase. (751 aa)
	pde11a	Phosphodiesterase. (768 aa)
	LOC110965925	PDEase domain-containing protein. (154 aa)
	LOC110958332	Phosphodiesterase. (585 aa)
	LOC110967901	Phosphodiesterase. (440 aa)
	pde1b	Phosphodiesterase. (506 aa)
	LOC110959280	Phosphodiesterase. (1108 aa)
	pde4b	Phosphodiesterase. (765 aa)
	pde7b	Phosphodiesterase. (501 aa)
	PDE3A	Phosphodiesterase. (1038 aa)
	LOC110966378	Phosphodiesterase. (909 aa)
	pde9a	Phosphodiesterase. (509 aa)
	LOC110963451	Phosphodiesterase. (756 aa)
	pde3b	Phosphodiesterase. (1103 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000032537	LOC110952687	ENSAPOP00000032537	ENSAPOP00000028874	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.553
ENSAPOP00000032537	LOC110957080	ENSAPOP00000032537	ENSAPOP00000034298	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.553
ENSAPOP00000032537	LOC110958332	ENSAPOP00000032537	ENSAPOP00000016217	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.553
ENSAPOP00000032537	pde1b	ENSAPOP00000032537	ENSAPOP00000015678	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.553
ENSAPOP00000032537	pde8a	ENSAPOP00000032537	ENSAPOP00000023254	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.560
ENSAPOP00000032537	pde8b	ENSAPOP00000032537	ENSAPOP00000030819	Phosphodiesterase 5A, cGMP-specific, a.	Phosphodiesterase.	0.560
LOC110950708	LOC110951428	ENSAPOP00000020356	ENSAPOP00000030977	Phosphodiesterase.	Phosphodiesterase.	0.559
LOC110950708	LOC110952687	ENSAPOP00000020356	ENSAPOP00000028874	Phosphodiesterase.	Phosphodiesterase.	0.577
LOC110950708	LOC110957080	ENSAPOP00000020356	ENSAPOP00000034298	Phosphodiesterase.	Phosphodiesterase.	0.577
LOC110950708	LOC110958332	ENSAPOP00000020356	ENSAPOP00000016217	Phosphodiesterase.	Phosphodiesterase.	0.577
LOC110950708	LOC110959280	ENSAPOP00000020356	ENSAPOP00000012427	Phosphodiesterase.	Phosphodiesterase.	0.605
LOC110950708	LOC110959353	ENSAPOP00000020356	ENSAPOP00000023044	Phosphodiesterase.	Phosphodiesterase.	0.543
LOC110950708	LOC110965925	ENSAPOP00000020356	ENSAPOP00000002057	Phosphodiesterase.	PDEase domain-containing protein.	0.559
LOC110950708	PDE2A	ENSAPOP00000020356	ENSAPOP00000021669	Phosphodiesterase.	Phosphodiesterase.	0.559
LOC110950708	PDE3A	ENSAPOP00000020356	ENSAPOP00000008343	Phosphodiesterase.	Phosphodiesterase.	0.605
LOC110950708	pde10a	ENSAPOP00000020356	ENSAPOP00000000848	Phosphodiesterase.	Phosphodiesterase.	0.559
LOC110950708	pde11a	ENSAPOP00000020356	ENSAPOP00000016492	Phosphodiesterase.	Phosphodiesterase.	0.559
LOC110950708	pde1b	ENSAPOP00000020356	ENSAPOP00000015678	Phosphodiesterase.	Phosphodiesterase.	0.577
LOC110950708	pde3b	ENSAPOP00000020356	ENSAPOP00000002821	Phosphodiesterase.	Phosphodiesterase.	0.605
LOC110950708	pde5a	ENSAPOP00000020356	ENSAPOP00000030545	Phosphodiesterase.	Phosphodiesterase.	0.559