59 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110958742	RHD domain-containing protein. (901 aa)
	LOC110962995	RHD domain-containing protein. (894 aa)
	nfkb1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (763 aa)
	runx3	Runt-related transcription factor. (406 aa)
	tbr1	T-box brain transcription factor 1b. (677 aa)
	LOC110953710	MAX dimerization protein MGA a. (2858 aa)
	LOC110969782	T-box transcription factor Ta. (407 aa)
	LOC110959616	Uncharacterized protein. (618 aa)
	tbx21	T-box transcription factor 21. (618 aa)
	LOC110949206	Signal transducer and activator of transcription. (830 aa)
	LOC110965656	Runt-related transcription factor. (449 aa)
	LOC110962689	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (373 aa)
	LOC110951899	T-box transcription factor 18. (520 aa)
	LOC110971368	Uncharacterized protein. (383 aa)
	tbx5	Uncharacterized protein. (574 aa)
	LOC110957365	Nuclear factor of activated T cells 5b. (1290 aa)
	tp73	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (596 aa)
	relb	V-rel avian reticuloendotheliosis viral oncogene homolog B. (649 aa)
	LOC110962015	V-rel avian reticuloendotheliosis viral oncogene homolog A. (635 aa)
	tbx1	T-box transcription factor 1. (415 aa)
	stat4	Signal transducer and activator of transcription. (731 aa)
	ENSAPOP00000012867	SH2 domain-containing protein. (528 aa)
	tbx15	T-box transcription factor 15. (611 aa)
	LOC110969033	Uncharacterized protein. (704 aa)
	LOC110959050	Uncharacterized protein. (370 aa)
	ENSAPOP00000011672	RHD domain-containing protein. (536 aa)
	ENSAPOP00000008235	Uncharacterized protein. (130 aa)
	ENSAPOP00000008017	SH2 domain-containing protein. (223 aa)
	ENSAPOP00000007690	Myelin regulatory factor. (567 aa)
	LOC110963956	Runt domain-containing protein. (296 aa)
	TBX2	T-box transcription factor 2. (684 aa)
	tbx4	T-box transcription factor 4. (544 aa)
	tbx3	T-box transcription factor 3a. (710 aa)
	myrfl	Myelin regulatory factor like. (834 aa)
	nfkb2	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (905 aa)
	nfatc4	Nuclear factor of activated T cells 4. (808 aa)
	nfatc3	Nuclear factor of activated T cells 3a. (1102 aa)
	LOC110958607	Signal transducer and activator of transcription. (778 aa)
	rbpj	Recombination signal binding protein for immunoglobulin kappa J region. (490 aa)
	REL	REL proto-oncogene, NF-kB subunit. (645 aa)
	LOC110960568	Nuclear factor of activated T cells 1. (850 aa)
	LOC110956423	Nuclear factor of activated T cells 5a. (1458 aa)
	nfatc2	Nuclear factor of activated T cells 2a. (901 aa)
	LOC110954674	Recombination signal binding protein for immunoglobulin kappa J region a. (496 aa)
	LOC110959373	Signal transducer and activator of transcription. (786 aa)
	ENSAPOP00000024267	RHD domain-containing protein. (61 aa)
	LOC110967554	T-box transcription factor 16. (472 aa)
	LOC110965922	T-box transcription factor 5a. (525 aa)
	tbx20	T-box transcription factor 20. (439 aa)
	tp63	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (574 aa)
	LOC110970432	Eomesodermin homolog b. (601 aa)
	TBX22	T-box transcription factor 22. (462 aa)
	ENSAPOP00000016105	Uncharacterized protein. (408 aa)
	ENSAPOP00000018133	Uncharacterized protein. (228 aa)
	LOC110963107	Runt-related transcription factor. (487 aa)
	LOC110971610	Signal transducer and activator of transcription. (764 aa)
	tbxt	T-box transcription factor Tb. (437 aa)
	eomes	Eomesodermin homolog a. (646 aa)
	stat3	Signal transducer and activator of transcription. (785 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000008017	ENSAPOP00000012867	ENSAPOP00000008017	ENSAPOP00000012867	SH2 domain-containing protein.	SH2 domain-containing protein.	0.560
ENSAPOP00000008017	LOC110949206	ENSAPOP00000008017	ENSAPOP00000029271	SH2 domain-containing protein.	Signal transducer and activator of transcription.	0.660
ENSAPOP00000008017	LOC110958607	ENSAPOP00000008017	ENSAPOP00000004471	SH2 domain-containing protein.	Signal transducer and activator of transcription.	0.629
ENSAPOP00000008017	LOC110962015	ENSAPOP00000008017	ENSAPOP00000013764	SH2 domain-containing protein.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.453
ENSAPOP00000008017	LOC110962689	ENSAPOP00000008017	ENSAPOP00000027715	SH2 domain-containing protein.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.452
ENSAPOP00000008017	LOC110971610	ENSAPOP00000008017	ENSAPOP00000000783	SH2 domain-containing protein.	Signal transducer and activator of transcription.	0.639
ENSAPOP00000008017	REL	ENSAPOP00000008017	ENSAPOP00000003359	SH2 domain-containing protein.	REL proto-oncogene, NF-kB subunit.	0.453
ENSAPOP00000008017	relb	ENSAPOP00000008017	ENSAPOP00000014021	SH2 domain-containing protein.	V-rel avian reticuloendotheliosis viral oncogene homolog B.	0.453
ENSAPOP00000008017	stat3	ENSAPOP00000008017	ENSAPOP00000002542	SH2 domain-containing protein.	Signal transducer and activator of transcription.	0.695
ENSAPOP00000008017	stat4	ENSAPOP00000008017	ENSAPOP00000012939	SH2 domain-containing protein.	Signal transducer and activator of transcription.	0.639
ENSAPOP00000008235	LOC110963107	ENSAPOP00000008235	ENSAPOP00000017427	Uncharacterized protein.	Runt-related transcription factor.	0.579
ENSAPOP00000008235	LOC110963956	ENSAPOP00000008235	ENSAPOP00000007677	Uncharacterized protein.	Runt domain-containing protein.	0.527
ENSAPOP00000008235	LOC110965656	ENSAPOP00000008235	ENSAPOP00000028333	Uncharacterized protein.	Runt-related transcription factor.	0.542
ENSAPOP00000008235	runx3	ENSAPOP00000008235	ENSAPOP00000000035	Uncharacterized protein.	Runt-related transcription factor.	0.530
ENSAPOP00000011672	LOC110960568	ENSAPOP00000011672	ENSAPOP00000002926	RHD domain-containing protein.	Nuclear factor of activated T cells 1.	0.781
ENSAPOP00000011672	LOC110962995	ENSAPOP00000011672	ENSAPOP00000000254	RHD domain-containing protein.	RHD domain-containing protein.	0.781
ENSAPOP00000011672	nfatc2	ENSAPOP00000011672	ENSAPOP00000021674	RHD domain-containing protein.	Nuclear factor of activated T cells 2a.	0.826
ENSAPOP00000011672	nfatc3	ENSAPOP00000011672	ENSAPOP00000004787	RHD domain-containing protein.	Nuclear factor of activated T cells 3a.	0.896
ENSAPOP00000011672	nfatc4	ENSAPOP00000011672	ENSAPOP00000005744	RHD domain-containing protein.	Nuclear factor of activated T cells 4.	0.836
ENSAPOP00000012867	ENSAPOP00000008017	ENSAPOP00000012867	ENSAPOP00000008017	SH2 domain-containing protein.	SH2 domain-containing protein.	0.560