25 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rcor2	REST corepressor 2. (348 aa)
	mta2	Metastasis associated 1 family, member 2. (663 aa)
	cramp1	Cramped chromatin regulator homolog 1. (933 aa)
	smarcc1	Uncharacterized protein. (1132 aa)
	LOC110962055	REST corepressor 3. (505 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1047 aa)
	mysm1	Myb-like, SWIRM and MPN domains 1. (872 aa)
	LOC110963723	Arginine-glutamic acid dipeptide (RE) repeats b. (1135 aa)
	mier1	Mesoderm induction early response 1b, transcriptional regulator. (533 aa)
	tada2a	Transcriptional adapter. (445 aa)
	mier3	Mesoderm induction early response 1, family member 3 b. (584 aa)
	mta1	Metastasis associated 1. (619 aa)
	tada2b	Transcriptional adapter. (527 aa)
	LOC110965599	Mesoderm induction early response 1, family member 2. (480 aa)
	LOC110960230	ELM2 and Myb/SANT-like domain containing 1a. (1068 aa)
	ncor1	Nuclear receptor corepressor 1. (2407 aa)
	mis18bp1	SANT domain-containing protein. (1100 aa)
	LOC110962034	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1036 aa)
	rere	Arginine-glutamic acid dipeptide (RE) repeats a. (1578 aa)
	LOC110948364	Metastasis associated 1 family, member 3. (700 aa)
	dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2. (618 aa)
	ncor2	Nuclear receptor corepressor 2. (1837 aa)
	LOC110954604	ELM2 and Myb/SANT-like domain containing 1b. (1114 aa)
	LOC110957003	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (880 aa)
	rcor1	REST corepressor 1. (459 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110948364	LOC110962034	ENSAPOP00000021374	ENSAPOP00000013176	Metastasis associated 1 family, member 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.618
LOC110948364	LOC110962055	ENSAPOP00000021374	ENSAPOP00000028655	Metastasis associated 1 family, member 3.	REST corepressor 3.	0.610
LOC110948364	rcor1	ENSAPOP00000021374	ENSAPOP00000024918	Metastasis associated 1 family, member 3.	REST corepressor 1.	0.610
LOC110948364	rcor2	ENSAPOP00000021374	ENSAPOP00000025591	Metastasis associated 1 family, member 3.	REST corepressor 2.	0.610
LOC110957003	LOC110962034	ENSAPOP00000024058	ENSAPOP00000013176	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.754
LOC110957003	smarcc2	ENSAPOP00000024058	ENSAPOP00000033188	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.521
LOC110962034	LOC110948364	ENSAPOP00000013176	ENSAPOP00000021374	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Metastasis associated 1 family, member 3.	0.618
LOC110962034	LOC110957003	ENSAPOP00000013176	ENSAPOP00000024058	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	0.754
LOC110962034	LOC110962055	ENSAPOP00000013176	ENSAPOP00000028655	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	REST corepressor 3.	0.621
LOC110962034	mta1	ENSAPOP00000013176	ENSAPOP00000004478	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Metastasis associated 1.	0.618
LOC110962034	mta2	ENSAPOP00000013176	ENSAPOP00000027805	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Metastasis associated 1 family, member 2.	0.618
LOC110962034	mysm1	ENSAPOP00000013176	ENSAPOP00000031756	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Myb-like, SWIRM and MPN domains 1.	0.825
LOC110962034	ncor1	ENSAPOP00000013176	ENSAPOP00000000887	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Nuclear receptor corepressor 1.	0.482
LOC110962034	ncor2	ENSAPOP00000013176	ENSAPOP00000022658	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Nuclear receptor corepressor 2.	0.482
LOC110962034	rcor1	ENSAPOP00000013176	ENSAPOP00000024918	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	REST corepressor 1.	0.621
LOC110962034	rcor2	ENSAPOP00000013176	ENSAPOP00000025591	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	REST corepressor 2.	0.621
LOC110962034	smarcc1	ENSAPOP00000013176	ENSAPOP00000028619	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	Uncharacterized protein.	0.754
LOC110962034	smarcc2	ENSAPOP00000013176	ENSAPOP00000033188	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.754
LOC110962055	LOC110948364	ENSAPOP00000028655	ENSAPOP00000021374	REST corepressor 3.	Metastasis associated 1 family, member 3.	0.610
LOC110962055	LOC110962034	ENSAPOP00000028655	ENSAPOP00000013176	REST corepressor 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.621