24 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110961396	Si:dkey-44k1.5. (905 aa)
	LOC110960642	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
	LOC110956464	Cyclic nucleotide gated channel subunit alpha 3a. (656 aa)
	LOC110945365	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like. (87 aa)
	RHO	Rhodopsin. (353 aa)
	PDE6G-2	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like. (87 aa)
	pde6a	Phosphodiesterase. (862 aa)
	ENSAPOP00000031010	Cyclic nucleotide gated channel beta 3, tandem duplicate 2. (593 aa)
	LOC110970207	Cyclic nucleotide gated channel beta 3, tandem duplicate 1. (628 aa)
	ENSAPOP00000030591	annotation not available (184 aa)
	pde6c	Phosphodiesterase. (856 aa)
	ENSAPOP00000029364	Cyclic nucleotide gated channel beta 1a. (743 aa)
	LOC110968113	Cyclic nucleotide gated channel subunit alpha 1b. (795 aa)
	PDE6G	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a. (87 aa)
	LOC110959353	Phosphodiesterase. (842 aa)
	LOC110956443	Rhodopsin. (352 aa)
	pde6g	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b. (115 aa)
	LOC110969136	Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)
	LOC110961962	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (353 aa)
	LOC110947921	Rhodopsin. (341 aa)
	LOC110947922	Rhodopsin. (349 aa)
	ENSAPOP00000014353	GAF domain-containing protein. (184 aa)
	LOC110965180	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	LOC110972167	Cyclic nucleotide-binding domain-containing protein. (673 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000014353	ENSAPOP00000029364	ENSAPOP00000014353	ENSAPOP00000029364	GAF domain-containing protein.	Cyclic nucleotide gated channel beta 1a.	0.406
ENSAPOP00000014353	LOC110945365	ENSAPOP00000014353	ENSAPOP00000034570	GAF domain-containing protein.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like.	0.852
ENSAPOP00000014353	LOC110959353	ENSAPOP00000014353	ENSAPOP00000023044	GAF domain-containing protein.	Phosphodiesterase.	0.842
ENSAPOP00000014353	LOC110960642	ENSAPOP00000014353	ENSAPOP00000001231	GAF domain-containing protein.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.758
ENSAPOP00000014353	LOC110961396	ENSAPOP00000014353	ENSAPOP00000015049	GAF domain-containing protein.	Si:dkey-44k1.5.	0.406
ENSAPOP00000014353	LOC110961962	ENSAPOP00000014353	ENSAPOP00000015583	GAF domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.934
ENSAPOP00000014353	LOC110965180	ENSAPOP00000014353	ENSAPOP00000008313	GAF domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.857
ENSAPOP00000014353	LOC110969136	ENSAPOP00000014353	ENSAPOP00000016468	GAF domain-containing protein.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.758
ENSAPOP00000014353	PDE6G	ENSAPOP00000014353	ENSAPOP00000023481	GAF domain-containing protein.	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	0.852
ENSAPOP00000014353	PDE6G-2	ENSAPOP00000014353	ENSAPOP00000032116	GAF domain-containing protein.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like.	0.852
ENSAPOP00000014353	pde6g	ENSAPOP00000014353	ENSAPOP00000018679	GAF domain-containing protein.	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	0.949
ENSAPOP00000029364	ENSAPOP00000014353	ENSAPOP00000029364	ENSAPOP00000014353	Cyclic nucleotide gated channel beta 1a.	GAF domain-containing protein.	0.406
ENSAPOP00000029364	ENSAPOP00000030591	ENSAPOP00000029364	ENSAPOP00000030591	Cyclic nucleotide gated channel beta 1a.	annotation not available	0.406
ENSAPOP00000029364	LOC110947921	ENSAPOP00000029364	ENSAPOP00000015113	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.437
ENSAPOP00000029364	LOC110947922	ENSAPOP00000029364	ENSAPOP00000015083	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.437
ENSAPOP00000029364	LOC110956443	ENSAPOP00000029364	ENSAPOP00000022159	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.437
ENSAPOP00000029364	LOC110956464	ENSAPOP00000029364	ENSAPOP00000001080	Cyclic nucleotide gated channel beta 1a.	Cyclic nucleotide gated channel subunit alpha 3a.	0.884
ENSAPOP00000029364	LOC110959353	ENSAPOP00000029364	ENSAPOP00000023044	Cyclic nucleotide gated channel beta 1a.	Phosphodiesterase.	0.466
ENSAPOP00000029364	LOC110961962	ENSAPOP00000029364	ENSAPOP00000015583	Cyclic nucleotide gated channel beta 1a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.676
ENSAPOP00000029364	LOC110968113	ENSAPOP00000029364	ENSAPOP00000026787	Cyclic nucleotide gated channel beta 1a.	Cyclic nucleotide gated channel subunit alpha 1b.	0.890