37 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110968365	Spectrin beta chain; Belongs to the spectrin family. (2034 aa)
	ENSAPOP00000001524	PH domain-containing protein. (128 aa)
	ptpra	Protein tyrosine phosphatase receptor type A. (844 aa)
	LOC110971558	Uncharacterized protein. (354 aa)
	LOC110955923	Tyrosine-protein kinase. (537 aa)
	LOC110963542	Spectrin, beta, non-erythrocytic 5. (3138 aa)
	LOC110962835	Spectrin beta chain; Belongs to the spectrin family. (2342 aa)
	LOC110970652	Spectrin beta chain; Belongs to the spectrin family. (2283 aa)
	st8sia2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (387 aa)
	LOC110972995	Spectrin beta chain; Belongs to the spectrin family. (2496 aa)
	sptan1	Spectrin alpha, non-erythrocytic 1. (2348 aa)
	cntn2	Contactin 2. (870 aa)
	creb1	Uncharacterized protein. (339 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	sptbn4	Spectrin, beta, non-erythrocytic 4b. (1944 aa)
	LOC110958411	Ribosomal protein S6 kinase. (784 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (868 aa)
	LOC110966827	Neural cell adhesion molecule 3. (702 aa)
	ENSAPOP00000013404	Collagen, type V, alpha 2a. (929 aa)
	LOC110953137	Ribosomal protein S6 kinase. (808 aa)
	LOC110953641	Receptor-type tyrosine-protein phosphatase. (680 aa)
	LOC110956575	Collagen, type IV, alpha 5 (Alport syndrome). (1416 aa)
	LOC110966635	Uncharacterized protein. (322 aa)
	LOC110952860	cAMP responsive element binding protein 1. (318 aa)
	ncam2	Zgc:152904. (807 aa)
	ncam1	Neural cell adhesion molecule 1b. (1217 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	ENSAPOP00000032201	Procollagen, type IX, alpha 2. (555 aa)
	LOC110956697	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (391 aa)
	LOC110958343	Neural cell adhesion molecule 1a. (658 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	ptpre	Receptor-type tyrosine-protein phosphatase. (682 aa)
	LOC110945879	Mitogen-activated protein kinase. (313 aa)
	LOC110960299	Zgc:55558. (187 aa)
	MAPK1	Mitogen-activated protein kinase. (150 aa)
	LOC110949300	PH domain-containing protein. (1686 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC110945879	ENSAPOP00000012747	ENSAPOP00000028293	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase.	0.660
CSDE1	LOC110953137	ENSAPOP00000012747	ENSAPOP00000017867	Cold shock domain containing E1, RNA-binding.	Ribosomal protein S6 kinase.	0.551
CSDE1	LOC110953641	ENSAPOP00000012747	ENSAPOP00000019082	Cold shock domain containing E1, RNA-binding.	Receptor-type tyrosine-protein phosphatase.	0.491
CSDE1	LOC110955923	ENSAPOP00000012747	ENSAPOP00000002259	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.679
CSDE1	LOC110956697	ENSAPOP00000012747	ENSAPOP00000031576	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
CSDE1	LOC110958343	ENSAPOP00000012747	ENSAPOP00000030717	Cold shock domain containing E1, RNA-binding.	Neural cell adhesion molecule 1a.	0.452
CSDE1	LOC110958411	ENSAPOP00000012747	ENSAPOP00000012215	Cold shock domain containing E1, RNA-binding.	Ribosomal protein S6 kinase.	0.551
CSDE1	LOC110966827	ENSAPOP00000012747	ENSAPOP00000012957	Cold shock domain containing E1, RNA-binding.	Neural cell adhesion molecule 3.	0.452
CSDE1	LOC110971558	ENSAPOP00000012747	ENSAPOP00000001781	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.452
CSDE1	MAPK1	ENSAPOP00000012747	ENSAPOP00000027566	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase.	0.660
CSDE1	grb2	ENSAPOP00000012747	ENSAPOP00000021957	Cold shock domain containing E1, RNA-binding.	Growth factor receptor-bound protein 2b.	0.839
CSDE1	mapk1	ENSAPOP00000012747	ENSAPOP00000010041	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
CSDE1	ncam1	ENSAPOP00000012747	ENSAPOP00000032397	Cold shock domain containing E1, RNA-binding.	Neural cell adhesion molecule 1b.	0.452
CSDE1	ncam2	ENSAPOP00000012747	ENSAPOP00000034383	Cold shock domain containing E1, RNA-binding.	Zgc:152904.	0.452
CSDE1	ptpra	ENSAPOP00000012747	ENSAPOP00000001602	Cold shock domain containing E1, RNA-binding.	Protein tyrosine phosphatase receptor type A.	0.633
CSDE1	ptpre	ENSAPOP00000012747	ENSAPOP00000023864	Cold shock domain containing E1, RNA-binding.	Receptor-type tyrosine-protein phosphatase.	0.491
CSDE1	sptan1	ENSAPOP00000012747	ENSAPOP00000007967	Cold shock domain containing E1, RNA-binding.	Spectrin alpha, non-erythrocytic 1.	0.605
ENSAPOP00000001524	LOC110968365	ENSAPOP00000001524	ENSAPOP00000001447	PH domain-containing protein.	Spectrin beta chain; Belongs to the spectrin family.	0.872
ENSAPOP00000001524	sptan1	ENSAPOP00000001524	ENSAPOP00000007967	PH domain-containing protein.	Spectrin alpha, non-erythrocytic 1.	0.947
ENSAPOP00000032201	LOC110958343	ENSAPOP00000032201	ENSAPOP00000030717	Procollagen, type IX, alpha 2.	Neural cell adhesion molecule 1a.	0.402