115 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	anapc11	APC11 anaphase promoting complex subunit 11 homolog (yeast). (84 aa)
	ENSAPOP00000000579	Proteasome subunit beta11b. (352 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (807 aa)
	anapc15	Anaphase promoting complex subunit 15. (125 aa)
	ccna2	Cyclin A2; Belongs to the cyclin family. (436 aa)
	fam89b	Family with sequence similarity 89 member B. (175 aa)
	FZR1	Fizzy/cell division cycle 20 related 1a. (496 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	ENSAPOP00000003675	Ubiquitin-like domain-containing protein. (84 aa)
	fbxo5	F-box protein 5. (437 aa)
	cdc23	CDC23 (cell division cycle 23, yeast, homolog). (575 aa)
	LOC110962302	Proteasome subunit alpha type. (246 aa)
	ENSAPOP00000004868	Proteasome subunit alpha type. (241 aa)
	cdk2	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
	LOC110965259	Proteasome subunit alpha type. (293 aa)
	anapc2	Anaphase promoting complex subunit 2; Belongs to the cullin family. (818 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	psma6	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (321 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	LOC110963367	Aurora kinase B; Belongs to the protein kinase superfamily. (332 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	LOC110961572	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	bub1b	BUB1 mitotic checkpoint serine/threonine kinase Bb. (431 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
	LOC110964535	Proteasome subunit beta 12. (248 aa)
	ENSAPOP00000009440	Proteasome subunit beta 6. (211 aa)
	ENSAPOP00000009477	Uncharacterized protein. (289 aa)
	psma1	Proteasome subunit alpha type. (262 aa)
	bicra	BRD4 interacting chromatin remodeling complex associated protein. (1900 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	psmd2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (906 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	ENSAPOP00000012267	Uncharacterized protein. (100 aa)
	LOC110949710	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (191 aa)
	LOC110952066	BLM10_mid domain-containing protein. (542 aa)
	LOC110954939	Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family. (288 aa)
	mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast). (202 aa)
	LOC110945643	DUF3437 domain-containing protein. (132 aa)
	ENSAPOP00000014855	Uncharacterized protein. (564 aa)
	ENSAPOP00000015008	annotation not available (564 aa)
	ccnb1	Cyclin B1; Belongs to the cyclin family. (399 aa)
	skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (482 aa)
	psmf1	Proteasome inhibitor subunit 1. (273 aa)
	LOC110961378	WD_REPEATS_REGION domain-containing protein. (494 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	bub3	BUB3 mitotic checkpoint protein. (326 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (170 aa)
	nek2	NIMA-related kinase 2. (445 aa)
	LOC110963708	Proteasome subunit beta. (251 aa)
	LOC110971768	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	psmb7	Proteasome subunit beta. (277 aa)
	psme2	Proteasome activator subunit 2. (245 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (440 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	LOC110969090	Uncharacterized protein. (1785 aa)
	LOC110971673	Proteasome subunit beta 12. (144 aa)
	LOC110950752	Fizzy/cell division cycle 20 related 1b. (487 aa)
	anapc4	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family. (805 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC110966624	Uncharacterized protein. (543 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (303 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (328 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (379 aa)
	rb1	Retinoblastoma 1. (905 aa)
	LOC110968897	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	bicral	BRD4 interacting chromatin remodeling complex associated protein like. (800 aa)
	LOC110955197	Tankyrase_bdg_C domain-containing protein. (1472 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (518 aa)
	ccna1	Cyclin A1; Belongs to the cyclin family. (419 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	anapc1	Anaphase promoting complex subunit 1. (1978 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (346 aa)
	tm7sf3	Transmembrane 7 superfamily member 3. (565 aa)
	ENSAPOP00000024710	Uncharacterized protein. (198 aa)
	anapc7	Anaphase promoting complex subunit 7. (565 aa)
	anapc10	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (186 aa)
	FBXO43	F-box protein 43. (595 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC110956230	Proteasome subunit alpha type. (262 aa)
	LOC110964538	Proteasome subunit beta 13a. (180 aa)
	LOC110964534	Proteasome subunit beta. (275 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	cdc20b	Uncharacterized protein. (750 aa)
	LOC110965303	Uncharacterized protein. (185 aa)
	cdc16	Cell division cycle 16 homolog (S. cerevisiae). (517 aa)
	cdc26	Cell division cycle 26 homolog. (96 aa)
	psme1	Proteasome activator subunit 1. (276 aa)
	fam89a	Family with sequence similarity 89 member A. (180 aa)
	LOC110953272	Proteasome subunit beta. (293 aa)
	ENSAPOP00000029028	Proteasome subunit beta. (298 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
	LOC110949720	Ubiquitin-conjugating enzyme E2E 1. (235 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	anapc16	Anaphase promoting complex subunit 16. (83 aa)
	ube2c	Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. (191 aa)
	ENSAPOP00000031975	Uncharacterized protein. (92 aa)
	ENSAPOP00000031989	UBIQUITIN_CONJUGAT_2 domain-containing protein. (66 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	aurka	Aurora kinase A; Belongs to the protein kinase superfamily. (427 aa)
	cdc20	Cell division cycle 20 homolog. (502 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	cdc27	Cell division cycle 27. (803 aa)
	LOC110971677	Proteasome subunit beta 9a. (157 aa)
	ENSAPOP00000033581	Proteasome subunit beta 13a. (208 aa)
	LOC110971674	Proteasome subunit beta. (275 aa)
	anapc5	Anaphase promoting complex subunit 5. (773 aa)
	psma8	Proteasome subunit alpha type. (251 aa)
	LOC110952467	Proteasome 26S subunit, non-ATPase 4b. (375 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000000579	ENSAPOP00000003675	ENSAPOP00000000579	ENSAPOP00000003675	Proteasome subunit beta11b.	Ubiquitin-like domain-containing protein.	0.805
ENSAPOP00000000579	ENSAPOP00000004868	ENSAPOP00000000579	ENSAPOP00000004868	Proteasome subunit beta11b.	Proteasome subunit alpha type.	0.956
ENSAPOP00000000579	ENSAPOP00000009440	ENSAPOP00000000579	ENSAPOP00000009440	Proteasome subunit beta11b.	Proteasome subunit beta 6.	0.958
ENSAPOP00000000579	ENSAPOP00000009477	ENSAPOP00000000579	ENSAPOP00000009477	Proteasome subunit beta11b.	Uncharacterized protein.	0.911
ENSAPOP00000000579	ENSAPOP00000012267	ENSAPOP00000000579	ENSAPOP00000012267	Proteasome subunit beta11b.	Uncharacterized protein.	0.932
ENSAPOP00000000579	ENSAPOP00000014855	ENSAPOP00000000579	ENSAPOP00000014855	Proteasome subunit beta11b.	Uncharacterized protein.	0.780
ENSAPOP00000000579	ENSAPOP00000015008	ENSAPOP00000000579	ENSAPOP00000015008	Proteasome subunit beta11b.	annotation not available	0.780
ENSAPOP00000000579	ENSAPOP00000024710	ENSAPOP00000000579	ENSAPOP00000024710	Proteasome subunit beta11b.	Uncharacterized protein.	0.954
ENSAPOP00000000579	ENSAPOP00000031975	ENSAPOP00000000579	ENSAPOP00000031975	Proteasome subunit beta11b.	Uncharacterized protein.	0.424
ENSAPOP00000000579	ENSAPOP00000031989	ENSAPOP00000000579	ENSAPOP00000031989	Proteasome subunit beta11b.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.424
ENSAPOP00000000579	ENSAPOP00000033581	ENSAPOP00000000579	ENSAPOP00000033581	Proteasome subunit beta11b.	Proteasome subunit beta 13a.	0.965
ENSAPOP00000000579	LOC110945643	ENSAPOP00000000579	ENSAPOP00000014379	Proteasome subunit beta11b.	DUF3437 domain-containing protein.	0.780
ENSAPOP00000000579	LOC110949710	ENSAPOP00000000579	ENSAPOP00000012805	Proteasome subunit beta11b.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.424
ENSAPOP00000000579	LOC110949720	ENSAPOP00000000579	ENSAPOP00000029558	Proteasome subunit beta11b.	Ubiquitin-conjugating enzyme E2E 1.	0.424
ENSAPOP00000000579	LOC110952066	ENSAPOP00000000579	ENSAPOP00000013121	Proteasome subunit beta11b.	BLM10_mid domain-containing protein.	0.780
ENSAPOP00000000579	LOC110952467	ENSAPOP00000000579	ENSAPOP00000034486	Proteasome subunit beta11b.	Proteasome 26S subunit, non-ATPase 4b.	0.951
ENSAPOP00000000579	LOC110953272	ENSAPOP00000000579	ENSAPOP00000029023	Proteasome subunit beta11b.	Proteasome subunit beta.	0.591
ENSAPOP00000000579	LOC110954939	ENSAPOP00000000579	ENSAPOP00000013214	Proteasome subunit beta11b.	Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.	0.666
ENSAPOP00000000579	LOC110955197	ENSAPOP00000000579	ENSAPOP00000022209	Proteasome subunit beta11b.	Tankyrase_bdg_C domain-containing protein.	0.958
ENSAPOP00000000579	LOC110956230	ENSAPOP00000000579	ENSAPOP00000026909	Proteasome subunit beta11b.	Proteasome subunit alpha type.	0.972