STRINGSTRING
LOC110950712 LOC110950712 JUND JUND egr2 egr2 ascl1 ascl1 SRF SRF LOC110952874 LOC110952874 ENSAPOP00000027503 ENSAPOP00000027503 egr1 egr1 LOC110966286 LOC110966286 nab2 nab2 LOC110971396 LOC110971396 LOC110949854 LOC110949854 LOC110952860 LOC110952860 fosl1 fosl1 LOC110948871 LOC110948871 creb1 creb1 trib2 trib2 ENSAPOP00000011034 ENSAPOP00000011034 ENSAPOP00000011062 ENSAPOP00000011062 LOC110969868 LOC110969868 LOC110953693 LOC110953693 srf srf LOC110966635 LOC110966635 ENSAPOP00000019999 ENSAPOP00000019999 LOC110961237 LOC110961237 nab1 nab1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC110950712JunD proto-oncogene, AP-1 transcription factor subunit. (299 aa)
JUNDBZIP domain-containing protein. (297 aa)
egr2Early growth response 2b. (444 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (200 aa)
SRFSerum response factor. (243 aa)
LOC110952874Inhibitor of DNA binding 3. (117 aa)
ENSAPOP00000027503Early growth response 3. (346 aa)
egr1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (512 aa)
LOC110966286JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
nab2NGFI-A binding protein 2 (EGR1 binding protein 2). (498 aa)
LOC110971396Chromodomain helicase DNA binding protein 4a. (1807 aa)
LOC110949854Inhibitor of DNA binding 4. (141 aa)
LOC110952860cAMP responsive element binding protein 1. (318 aa)
fosl1FOS-like antigen 1a. (347 aa)
LOC110948871BHLH domain-containing protein. (464 aa)
creb1Uncharacterized protein. (339 aa)
trib2Tribbles pseudokinase 2. (345 aa)
ENSAPOP00000011034CHDCT2 domain-containing protein. (239 aa)
ENSAPOP00000011062PHD-type domain-containing protein. (131 aa)
LOC110969868Protein kinase domain-containing protein. (682 aa)
LOC110953693Tribbles pseudokinase 1. (356 aa)
srfMADS-box domain-containing protein. (602 aa)
LOC110966635Uncharacterized protein. (322 aa)
ENSAPOP00000019999Achaete-scute family bHLH transcription factor 1b. (187 aa)
LOC110961237ETS transcription factor ELK1. (604 aa)
nab1NGFI-A binding protein 1a (EGR1 binding protein 1). (501 aa)
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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