48 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110945851	Uncharacterized protein. (167 aa)
	vps37b	VPS37B subunit of ESCRT-I. (283 aa)
	mvb12a	Uncharacterized protein. (327 aa)
	LOC110957337	Zinc finger, FYVE domain containing 1. (776 aa)
	vps37a	VPS37A subunit of ESCRT-I. (382 aa)
	LOC110968697	VPS37C subunit of ESCRT-I. (360 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (438 aa)
	LOC110966998	Uncharacterized protein; Belongs to the AAA ATPase family. (447 aa)
	LOC110964002	Ubiquitin associated protein 1 like. (371 aa)
	LOC110952884	Si:ch211-11n16.2. (655 aa)
	ENSAPOP00000003675	Ubiquitin-like domain-containing protein. (84 aa)
	vps36	Vacuolar protein sorting 36 homolog. (382 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (767 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (508 aa)
	LOC110964116	Si:ch211-284f22.3. (304 aa)
	LOC110960873	Charged multivesicular body protein 4C. (224 aa)
	snf8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (257 aa)
	mvb12b	Multivesicular body subunit 12Ba. (309 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (325 aa)
	LOC110952610	Charged multivesicular body protein 5b. (219 aa)
	LOC110956060	Multivesicular body subunit 12Bb. (258 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (521 aa)
	ENSAPOP00000018973	Uncharacterized protein. (69 aa)
	ENSAPOP00000019069	Si:dkey-185p13.1. (91 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	CHMP4B	Charged multivesicular body protein 4B. (223 aa)
	LOC110948429	Zgc:123278. (192 aa)
	LOC110948428	Tumor susceptibility 101a. (390 aa)
	chmp7	Charged multivesicular body protein 7. (448 aa)
	ubap1	Ubiquitin associated protein 1. (467 aa)
	LOC110966509	Uncharacterized protein. (786 aa)
	chmp2b	Charged multivesicular body protein 2Bb. (216 aa)
	vps25	Vacuolar protein sorting 25 homolog. (174 aa)
	ENSAPOP00000025799	Uncharacterized protein. (94 aa)
	LOC110953934	Charged multivesicular body protein 6a. (207 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (427 aa)
	ubap1l	Ubiquitin associated protein 1-like a. (315 aa)
	tm9sf1	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (601 aa)
	chmp3	Charged multivesicular body protein 3. (220 aa)
	chmp2a	Charged multivesicular body protein 2A. (220 aa)
	ENSAPOP00000030176	Charged multivesicular body protein 4Bb. (250 aa)
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
	LOC110948506	Charged multivesicular body protein 6. (205 aa)
	LOC110969702	Charged multivesicular body protein 5a. (239 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (392 aa)
	cunh17orf75	Zgc:153240. (334 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP4B	ENSAPOP00000003675	ENSAPOP00000020156	ENSAPOP00000003675	Charged multivesicular body protein 4B.	Ubiquitin-like domain-containing protein.	0.674
CHMP4B	ENSAPOP00000019069	ENSAPOP00000020156	ENSAPOP00000019069	Charged multivesicular body protein 4B.	Si:dkey-185p13.1.	0.902
CHMP4B	LOC110945851	ENSAPOP00000020156	ENSAPOP00000011289	Charged multivesicular body protein 4B.	Uncharacterized protein.	0.919
CHMP4B	LOC110948428	ENSAPOP00000020156	ENSAPOP00000020191	Charged multivesicular body protein 4B.	Tumor susceptibility 101a.	0.793
CHMP4B	LOC110948429	ENSAPOP00000020156	ENSAPOP00000020174	Charged multivesicular body protein 4B.	Zgc:123278.	0.793
CHMP4B	LOC110948506	ENSAPOP00000020156	ENSAPOP00000032310	Charged multivesicular body protein 4B.	Charged multivesicular body protein 6.	0.966
CHMP4B	LOC110952610	ENSAPOP00000020156	ENSAPOP00000015151	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5b.	0.920
CHMP4B	LOC110953934	ENSAPOP00000020156	ENSAPOP00000026552	Charged multivesicular body protein 4B.	Charged multivesicular body protein 6a.	0.966
CHMP4B	LOC110956060	ENSAPOP00000020156	ENSAPOP00000015153	Charged multivesicular body protein 4B.	Multivesicular body subunit 12Bb.	0.683
CHMP4B	LOC110960873	ENSAPOP00000020156	ENSAPOP00000012926	Charged multivesicular body protein 4B.	Charged multivesicular body protein 4C.	0.817
CHMP4B	LOC110964116	ENSAPOP00000020156	ENSAPOP00000001796	Charged multivesicular body protein 4B.	Si:ch211-284f22.3.	0.606
CHMP4B	LOC110966998	ENSAPOP00000020156	ENSAPOP00000006505	Charged multivesicular body protein 4B.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.902
CHMP4B	LOC110968697	ENSAPOP00000020156	ENSAPOP00000007742	Charged multivesicular body protein 4B.	VPS37C subunit of ESCRT-I.	0.652
CHMP4B	LOC110969702	ENSAPOP00000020156	ENSAPOP00000033650	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5a.	0.920
CHMP4B	VPS4B	ENSAPOP00000020156	ENSAPOP00000033693	Charged multivesicular body protein 4B.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.902
CHMP4B	chmp2a	ENSAPOP00000020156	ENSAPOP00000030005	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2A.	0.987
CHMP4B	chmp2b	ENSAPOP00000020156	ENSAPOP00000023069	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2Bb.	0.953
CHMP4B	chmp3	ENSAPOP00000020156	ENSAPOP00000028902	Charged multivesicular body protein 4B.	Charged multivesicular body protein 3.	0.990
CHMP4B	chmp7	ENSAPOP00000020156	ENSAPOP00000021857	Charged multivesicular body protein 4B.	Charged multivesicular body protein 7.	0.970
CHMP4B	cunh17orf75	ENSAPOP00000020156	ENSAPOP00000034441	Charged multivesicular body protein 4B.	Zgc:153240.	0.876