77 items (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	kxd1	KxDL motif containing 1. (184 aa)
	LOC110952467	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	LOC110971674	Proteasome subunit beta. (275 aa)
	ENSAPOP00000033581	Proteasome subunit beta 13a. (208 aa)
	LOC110971677	Proteasome subunit beta 9a. (157 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	crebbp	CREB binding protein b. (2440 aa)
	LOC110946591	Nuclear factor erythroid 2-related factor 1-like. (457 aa)
	LOC110946604	BZIP domain-containing protein. (457 aa)
	LOC110964177	Peroxiredoxin 1. (198 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
	LOC110953272	Proteasome subunit beta. (293 aa)
	psme1	Proteasome activator subunit 1. (276 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	LOC110948069	CREB binding protein a. (2412 aa)
	LOC110964534	Proteasome subunit beta. (275 aa)
	LOC110964538	Proteasome subunit beta 13a. (180 aa)
	LOC110956230	Proteasome subunit alpha type. (262 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	ENSAPOP00000024821	BZIP domain-containing protein. (364 aa)
	ENSAPOP00000024710	Uncharacterized protein. (198 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (346 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (390 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (518 aa)
	LOC110968897	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (379 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (328 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC110971673	Proteasome subunit beta 12. (144 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (440 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	LOC110953660	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
	psme2	Proteasome activator subunit 2. (245 aa)
	psmb7	Proteasome subunit beta. (277 aa)
	LOC110971768	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	LOC110963708	Proteasome subunit beta. (251 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (170 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	psmf1	Proteasome inhibitor subunit 1. (273 aa)
	LOC110945652	Cyclic AMP-dependent transcription factor ATF-4-like. (438 aa)
	NFE2L1	Nuclear factor, erythroid 2 like 1. (802 aa)
	ENSAPOP00000012267	Uncharacterized protein. (100 aa)
	LOC110968598	E1A binding protein p300 b. (2797 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	psmd2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (906 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	LOC110954476	E1A binding protein p300 a. (2800 aa)
	psma1	Proteasome subunit alpha type. (262 aa)
	ENSAPOP00000009477	Uncharacterized protein. (289 aa)
	ENSAPOP00000009440	Proteasome subunit beta 6. (211 aa)
	LOC110964535	Proteasome subunit beta 12. (248 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psma6	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (321 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	LOC110965259	Proteasome subunit alpha type. (293 aa)
	LOC110964677	Activating transcription factor 4b. (435 aa)
	LOC110962813	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	ENSAPOP00000004868	Proteasome subunit alpha type. (241 aa)
	LOC110962302	Proteasome subunit alpha type. (246 aa)
	ENSAPOP00000003675	Ubiquitin-like domain-containing protein. (84 aa)
	LOC110965885	Activating transcription factor 4a. (438 aa)
	srxn1	Sulfiredoxin. (149 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (615 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (807 aa)

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000003675	ENSAPOP00000004868	ENSAPOP00000003675	ENSAPOP00000004868	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type.	0.959
ENSAPOP00000003675	ENSAPOP00000009440	ENSAPOP00000003675	ENSAPOP00000009440	Ubiquitin-like domain-containing protein.	Proteasome subunit beta 6.	0.911
ENSAPOP00000003675	ENSAPOP00000009477	ENSAPOP00000003675	ENSAPOP00000009477	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.971
ENSAPOP00000003675	ENSAPOP00000012267	ENSAPOP00000003675	ENSAPOP00000012267	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.911
ENSAPOP00000003675	ENSAPOP00000024710	ENSAPOP00000003675	ENSAPOP00000024710	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.911
ENSAPOP00000003675	ENSAPOP00000024821	ENSAPOP00000003675	ENSAPOP00000024821	Ubiquitin-like domain-containing protein.	BZIP domain-containing protein.	0.679
ENSAPOP00000003675	ENSAPOP00000033581	ENSAPOP00000003675	ENSAPOP00000033581	Ubiquitin-like domain-containing protein.	Proteasome subunit beta 13a.	0.938
ENSAPOP00000003675	LOC110946591	ENSAPOP00000003675	ENSAPOP00000030787	Ubiquitin-like domain-containing protein.	Nuclear factor erythroid 2-related factor 1-like.	0.679
ENSAPOP00000003675	LOC110946604	ENSAPOP00000003675	ENSAPOP00000030712	Ubiquitin-like domain-containing protein.	BZIP domain-containing protein.	0.679
ENSAPOP00000003675	LOC110948069	ENSAPOP00000003675	ENSAPOP00000027544	Ubiquitin-like domain-containing protein.	CREB binding protein a.	0.734
ENSAPOP00000003675	LOC110952467	ENSAPOP00000003675	ENSAPOP00000034486	Ubiquitin-like domain-containing protein.	Proteasome 26S subunit, non-ATPase 4b.	0.979
ENSAPOP00000003675	LOC110953272	ENSAPOP00000003675	ENSAPOP00000029023	Ubiquitin-like domain-containing protein.	Proteasome subunit beta.	0.953
ENSAPOP00000003675	LOC110953660	ENSAPOP00000003675	ENSAPOP00000018120	Ubiquitin-like domain-containing protein.	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	0.730
ENSAPOP00000003675	LOC110954476	ENSAPOP00000003675	ENSAPOP00000010154	Ubiquitin-like domain-containing protein.	E1A binding protein p300 a.	0.734
ENSAPOP00000003675	LOC110956230	ENSAPOP00000003675	ENSAPOP00000026909	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type.	0.974
ENSAPOP00000003675	LOC110962302	ENSAPOP00000003675	ENSAPOP00000004831	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type.	0.959
ENSAPOP00000003675	LOC110962813	ENSAPOP00000003675	ENSAPOP00000005142	Ubiquitin-like domain-containing protein.	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.	0.730
ENSAPOP00000003675	LOC110963708	ENSAPOP00000003675	ENSAPOP00000016587	Ubiquitin-like domain-containing protein.	Proteasome subunit beta.	0.938
ENSAPOP00000003675	LOC110964534	ENSAPOP00000003675	ENSAPOP00000027284	Ubiquitin-like domain-containing protein.	Proteasome subunit beta.	0.953
ENSAPOP00000003675	LOC110964535	ENSAPOP00000003675	ENSAPOP00000009390	Ubiquitin-like domain-containing protein.	Proteasome subunit beta 12.	0.911