13 items (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111577269	BHLH domain-containing protein. (497 aa)
	mef2c	Myocyte enhancer factor 2cb. (474 aa)
	tcf3	Transcription factor 3b. (635 aa)
	ENSAOCP00000007753	Myogenic factor. (271 aa)
	LOC111587431	Myogenin. (250 aa)
	LOC111581022	Myogenic factor. (269 aa)
	MEF2D	Myocyte enhancer factor 2D. (509 aa)
	LOC111563330	MADS-box domain-containing protein. (461 aa)
	mef2a	Myocyte enhancer factor 2aa. (480 aa)
	nkx2-5	NK2 homeobox 5. (319 aa)
	mef2b	Myocyte enhancer factor 2b. (475 aa)
	LOC111564059	Myogenic factor. (297 aa)
	LOC111584680	Myocyte enhancer factor 2d. (581 aa)

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000007753	LOC111563330	ENSAOCP00000007753	ENSAOCP00000017764	Myogenic factor.	MADS-box domain-containing protein.	0.488
ENSAOCP00000007753	LOC111577269	ENSAOCP00000007753	ENSAOCP00000000441	Myogenic factor.	BHLH domain-containing protein.	0.641
ENSAOCP00000007753	LOC111584680	ENSAOCP00000007753	ENSAOCP00000029555	Myogenic factor.	Myocyte enhancer factor 2d.	0.544
ENSAOCP00000007753	LOC111587431	ENSAOCP00000007753	ENSAOCP00000009225	Myogenic factor.	Myogenin.	0.540
ENSAOCP00000007753	MEF2D	ENSAOCP00000007753	ENSAOCP00000015804	Myogenic factor.	Myocyte enhancer factor 2D.	0.544
ENSAOCP00000007753	mef2a	ENSAOCP00000007753	ENSAOCP00000022899	Myogenic factor.	Myocyte enhancer factor 2aa.	0.488
ENSAOCP00000007753	mef2b	ENSAOCP00000007753	ENSAOCP00000027546	Myogenic factor.	Myocyte enhancer factor 2b.	0.578
ENSAOCP00000007753	mef2c	ENSAOCP00000007753	ENSAOCP00000005976	Myogenic factor.	Myocyte enhancer factor 2cb.	0.488
ENSAOCP00000007753	tcf3	ENSAOCP00000007753	ENSAOCP00000006264	Myogenic factor.	Transcription factor 3b.	0.645
LOC111563330	ENSAOCP00000007753	ENSAOCP00000017764	ENSAOCP00000007753	MADS-box domain-containing protein.	Myogenic factor.	0.488
LOC111563330	LOC111564059	ENSAOCP00000017764	ENSAOCP00000028025	MADS-box domain-containing protein.	Myogenic factor.	0.498
LOC111563330	LOC111581022	ENSAOCP00000017764	ENSAOCP00000011992	MADS-box domain-containing protein.	Myogenic factor.	0.488
LOC111563330	LOC111584680	ENSAOCP00000017764	ENSAOCP00000029555	MADS-box domain-containing protein.	Myocyte enhancer factor 2d.	0.559
LOC111563330	LOC111587431	ENSAOCP00000017764	ENSAOCP00000009225	MADS-box domain-containing protein.	Myogenin.	0.644
LOC111563330	MEF2D	ENSAOCP00000017764	ENSAOCP00000015804	MADS-box domain-containing protein.	Myocyte enhancer factor 2D.	0.559
LOC111563330	mef2b	ENSAOCP00000017764	ENSAOCP00000027546	MADS-box domain-containing protein.	Myocyte enhancer factor 2b.	0.637
LOC111563330	nkx2-5	ENSAOCP00000017764	ENSAOCP00000027066	MADS-box domain-containing protein.	NK2 homeobox 5.	0.750
LOC111564059	LOC111563330	ENSAOCP00000028025	ENSAOCP00000017764	Myogenic factor.	MADS-box domain-containing protein.	0.498
LOC111564059	LOC111577269	ENSAOCP00000028025	ENSAOCP00000000441	Myogenic factor.	BHLH domain-containing protein.	0.641
LOC111564059	LOC111584680	ENSAOCP00000028025	ENSAOCP00000029555	Myogenic factor.	Myocyte enhancer factor 2d.	0.582