STRINGSTRING
LOC111570833 LOC111570833 LOC111573924 LOC111573924 sf3b3 sf3b3 lrmda lrmda ro60 ro60 prpf8 prpf8 snrpa1 snrpa1 coil coil
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111570833Leucine rich repeat containing 51. (177 aa)
LOC111573924Uncharacterized protein. (181 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
ro60Ro60, Y RNA binding protein. (537 aa)
prpf8Pre-mRNA processing factor 8. (2338 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (287 aa)
coilCoilin p80. (543 aa)
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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