STRINGSTRING
LOC111565122 LOC111565122 FGF6-2 FGF6-2 LOC111567911 LOC111567911 LOC111581294 LOC111581294 rb1 rb1 DDX5 DDX5 FGF6 FGF6 hinfp hinfp LOC111566896 LOC111566896 GREM1 GREM1 LOC111580807 LOC111580807 plekhm3 plekhm3 LOC111583664 LOC111583664 srf srf LOC111587356 LOC111587356 LOC111575674 LOC111575674 maml1 maml1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111565122Zgc:112083. (509 aa)
FGF6-2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
LOC111567911DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (605 aa)
LOC111581294DEAD-box helicase 17; Belongs to the DEAD box helicase family. (648 aa)
rb1Retinoblastoma 1. (893 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (635 aa)
FGF6Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
hinfpHistone H4 transcription factor. (490 aa)
LOC111566896Galectin. (135 aa)
GREM1Gremlin. (182 aa)
LOC111580807Uncharacterized protein; Belongs to the DEAD box helicase family. (648 aa)
plekhm3Pleckstrin homology domain containing, family M, member 3. (782 aa)
LOC111583664MADS-box domain-containing protein. (472 aa)
srfMADS-box domain-containing protein. (602 aa)
LOC111587356Galectin. (131 aa)
LOC111575674Gremlin 1a, DAN family BMP antagonist. (179 aa)
maml1Mastermind-like transcriptional coactivator 1. (1028 aa)
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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