(16 nodes) Posterior lateral line development network (Amphiprion ocellaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAOCP00000022476	MIB/HERC2 domain-containing protein. (85 aa)
	LOC111562641	Abhydrolase domain containing 12. (387 aa)
	tmem132e	Transmembrane protein 132E. (1048 aa)
	fgf3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
	llgl2	LLGL scribble cell polarity complex component 2. (1006 aa)
	LOC111579901	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
	yap1	Yes-associated protein 1. (438 aa)
	LOC111586409	Neurogenic differentiation factor. (357 aa)
	s1pr2	Sphingosine-1-phosphate receptor 2; Belongs to the G-protein coupled receptor 1 family. (371 aa)
	shtn1	Shootin 1. (506 aa)
	LOC111565189	Mothers against decapentaplegic homolog. (476 aa)
	rspo3	R-spondin 3. (330 aa)
	LOC111571065	Fibroblast growth factor receptor. (833 aa)
	gnb1	Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)
	znrf3	Zinc and ring finger 3. (896 aa)
	mib1	Mindbomb E3 ubiquitin protein ligase 1. (869 aa)

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000022476	mib1	ENSAOCP00000022476	ENSAOCP00000023954	MIB/HERC2 domain-containing protein.	Mindbomb E3 ubiquitin protein ligase 1.	0.899
LOC111565189	yap1	ENSAOCP00000012222	ENSAOCP00000004214	Mothers against decapentaplegic homolog.	Yes-associated protein 1.	0.700
LOC111571065	fgf3	ENSAOCP00000027705	ENSAOCP00000016487	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.862
LOC111579901	gnb1	ENSAOCP00000006560	ENSAOCP00000026259	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.900
fgf3	LOC111571065	ENSAOCP00000016487	ENSAOCP00000027705	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.862
gnb1	LOC111579901	ENSAOCP00000026259	ENSAOCP00000006560	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.900
mib1	ENSAOCP00000022476	ENSAOCP00000023954	ENSAOCP00000022476	Mindbomb E3 ubiquitin protein ligase 1.	MIB/HERC2 domain-containing protein.	0.899
rspo3	znrf3	ENSAOCP00000029685	ENSAOCP00000024162	R-spondin 3.	Zinc and ring finger 3.	0.983
yap1	LOC111565189	ENSAOCP00000004214	ENSAOCP00000012222	Yes-associated protein 1.	Mothers against decapentaplegic homolog.	0.700
znrf3	rspo3	ENSAOCP00000024162	ENSAOCP00000029685	Zinc and ring finger 3.	R-spondin 3.	0.983