36 items (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111577269	BHLH domain-containing protein. (497 aa)
	LOC111585327	Uncharacterized protein. (605 aa)
	ENSAOCP00000031027	BHLH domain-containing protein. (103 aa)
	LOC111585326	Uncharacterized protein. (913 aa)
	tcf15	Transcription factor 15. (179 aa)
	LOC111587909	Uncharacterized protein. (365 aa)
	bhlhe41	Basic helix-loop-helix family, member e41. (429 aa)
	TFAP4	Transcription factor AP-4. (369 aa)
	LOC111586133	Uncharacterized protein. (993 aa)
	ENSAOCP00000026759	BHLH domain-containing protein. (118 aa)
	LOC111584938	Uncharacterized protein. (360 aa)
	TCF15	Transcription factor 15. (181 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (655 aa)
	ENSAOCP00000020818	Uncharacterized protein. (51 aa)
	LOC111587640	Nuclear receptor subfamily 1, group D, member 4b. (572 aa)
	tcf21	Transcription factor 21. (173 aa)
	LOC111569670	Basic helix-loop-helix family, member e40. (410 aa)
	TCF4	Transcription factor 4. (695 aa)
	LOC111569100	Neurogenin 1. (191 aa)
	ENSAOCP00000015250	Uncharacterized protein. (216 aa)
	LOC111586728	Si:ch211-246m6.4. (198 aa)
	ARNTL2	Uncharacterized protein. (586 aa)
	LOC111562929	Nuclear receptor subfamily 1, group d, member 1. (495 aa)
	snai2	Snail family zinc finger 2. (260 aa)
	BHLHE40	Basic helix-loop-helix family member e40. (429 aa)
	LOC111572320	Transcription factor 3a. (661 aa)
	ciart	Circadian associated repressor of transcription a. (340 aa)
	LOC111587431	Myogenin. (250 aa)
	LOC111579981	PAS domain-containing protein. (1009 aa)
	LOC111586277	Aryl hydrocarbon receptor nuclear translocator-like 2. (597 aa)
	tcf3	Transcription factor 3b. (635 aa)
	LOC111571340	Aryl hydrocarbon receptor nuclear translocator-like 1a. (582 aa)
	LOC111568965	Hairy-related 3. (211 aa)
	scx	Scleraxis bHLH transcription factor a. (219 aa)
	LOC111582517	Transcription factor AP-4 (activating enhancer binding protein 4). (396 aa)
	LOC111578418	Transcription factor 12. (559 aa)

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL2	ENSAOCP00000026759	ENSAOCP00000014729	ENSAOCP00000026759	Uncharacterized protein.	BHLH domain-containing protein.	0.573
ARNTL2	ENSAOCP00000031027	ENSAOCP00000014729	ENSAOCP00000031027	Uncharacterized protein.	BHLH domain-containing protein.	0.573
ARNTL2	LOC111579981	ENSAOCP00000014729	ENSAOCP00000008826	Uncharacterized protein.	PAS domain-containing protein.	0.573
ARNTL2	LOC111585326	ENSAOCP00000014729	ENSAOCP00000030837	Uncharacterized protein.	Uncharacterized protein.	0.573
ARNTL2	LOC111585327	ENSAOCP00000014729	ENSAOCP00000031102	Uncharacterized protein.	Uncharacterized protein.	0.573
ARNTL2	LOC111586133	ENSAOCP00000014729	ENSAOCP00000026791	Uncharacterized protein.	Uncharacterized protein.	0.573
ARNTL2	bhlhe41	ENSAOCP00000014729	ENSAOCP00000028014	Uncharacterized protein.	Basic helix-loop-helix family, member e41.	0.421
BHLHE40	LOC111562929	ENSAOCP00000013074	ENSAOCP00000014148	Basic helix-loop-helix family member e40.	Nuclear receptor subfamily 1, group d, member 1.	0.506
BHLHE40	LOC111587640	ENSAOCP00000013074	ENSAOCP00000020793	Basic helix-loop-helix family member e40.	Nuclear receptor subfamily 1, group D, member 4b.	0.400
ENSAOCP00000015250	ENSAOCP00000026759	ENSAOCP00000015250	ENSAOCP00000026759	Uncharacterized protein.	BHLH domain-containing protein.	0.573
ENSAOCP00000015250	ENSAOCP00000031027	ENSAOCP00000015250	ENSAOCP00000031027	Uncharacterized protein.	BHLH domain-containing protein.	0.573
ENSAOCP00000015250	LOC111562929	ENSAOCP00000015250	ENSAOCP00000014148	Uncharacterized protein.	Nuclear receptor subfamily 1, group d, member 1.	0.475
ENSAOCP00000015250	LOC111579981	ENSAOCP00000015250	ENSAOCP00000008826	Uncharacterized protein.	PAS domain-containing protein.	0.573
ENSAOCP00000015250	LOC111585326	ENSAOCP00000015250	ENSAOCP00000030837	Uncharacterized protein.	Uncharacterized protein.	0.573
ENSAOCP00000015250	LOC111585327	ENSAOCP00000015250	ENSAOCP00000031102	Uncharacterized protein.	Uncharacterized protein.	0.573
ENSAOCP00000015250	LOC111586133	ENSAOCP00000015250	ENSAOCP00000026791	Uncharacterized protein.	Uncharacterized protein.	0.573
ENSAOCP00000015250	bhlhe41	ENSAOCP00000015250	ENSAOCP00000028014	Uncharacterized protein.	Basic helix-loop-helix family, member e41.	0.421
ENSAOCP00000020818	LOC111569100	ENSAOCP00000020818	ENSAOCP00000017347	Uncharacterized protein.	Neurogenin 1.	0.402
ENSAOCP00000020818	LOC111586728	ENSAOCP00000020818	ENSAOCP00000015145	Uncharacterized protein.	Si:ch211-246m6.4.	0.439
ENSAOCP00000020818	LOC111587431	ENSAOCP00000020818	ENSAOCP00000009225	Uncharacterized protein.	Myogenin.	0.676