(5 nodes) Oligosaccharyltransferase I complex network (Amphiprion ocellaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tmem258	Transmembrane protein 258. (79 aa)
	myrf	Myelin regulatory factor. (840 aa)
	LOC111564866	Uncharacterized protein. (676 aa)
	ENSAOCP00000005629	Uncharacterized protein. (135 aa)
	LOC111573751	STT3 oligosaccharyltransferase complex catalytic subunit B. (813 aa)

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000005629	tmem258	ENSAOCP00000005629	ENSAOCP00000014809	Uncharacterized protein.	Transmembrane protein 258.	0.820
LOC111564866	LOC111573751	ENSAOCP00000023190	ENSAOCP00000000351	Uncharacterized protein.	STT3 oligosaccharyltransferase complex catalytic subunit B.	0.900
LOC111564866	tmem258	ENSAOCP00000023190	ENSAOCP00000014809	Uncharacterized protein.	Transmembrane protein 258.	0.820
LOC111573751	LOC111564866	ENSAOCP00000000351	ENSAOCP00000023190	STT3 oligosaccharyltransferase complex catalytic subunit B.	Uncharacterized protein.	0.900
LOC111573751	tmem258	ENSAOCP00000000351	ENSAOCP00000014809	STT3 oligosaccharyltransferase complex catalytic subunit B.	Transmembrane protein 258.	0.820
tmem258	ENSAOCP00000005629	ENSAOCP00000014809	ENSAOCP00000005629	Transmembrane protein 258.	Uncharacterized protein.	0.820
tmem258	LOC111564866	ENSAOCP00000014809	ENSAOCP00000023190	Transmembrane protein 258.	Uncharacterized protein.	0.820
tmem258	LOC111573751	ENSAOCP00000014809	ENSAOCP00000000351	Transmembrane protein 258.	STT3 oligosaccharyltransferase complex catalytic subunit B.	0.820