(3 nodes) IKBKB, scaffold dimerization domain network (Amphiprion ocellaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111567460	Protein kinase domain-containing protein. (762 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	LOC111581409	Component of inhibitor of nuclear factor kappa B kinase complex. (756 aa)

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111567460	LOC111581409	ENSAOCP00000015107	ENSAOCP00000019791	Protein kinase domain-containing protein.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.942
LOC111567460	ikbkb	ENSAOCP00000015107	ENSAOCP00000000330	Protein kinase domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.953
LOC111581409	LOC111567460	ENSAOCP00000019791	ENSAOCP00000015107	Component of inhibitor of nuclear factor kappa B kinase complex.	Protein kinase domain-containing protein.	0.942
LOC111581409	ikbkb	ENSAOCP00000019791	ENSAOCP00000000330	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.903
ikbkb	LOC111567460	ENSAOCP00000000330	ENSAOCP00000015107	Inhibitor of nuclear factor kappa B kinase subunit beta.	Protein kinase domain-containing protein.	0.953
ikbkb	LOC111581409	ENSAOCP00000000330	ENSAOCP00000019791	Inhibitor of nuclear factor kappa B kinase subunit beta.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.903