STRINGSTRING
LRPPRC LRPPRC ngrn ngrn mtpap mtpap LOC102081219 LOC102081219 fastkd1 fastkd1 fastkd2 fastkd2 slirp slirp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRPPRCLeucine-rich pentatricopeptide repeat containing. (1470 aa)
ngrnNeugrin, neurite outgrowth associated. (307 aa)
mtpapMitochondrial poly(A) polymerase. (585 aa)
LOC102081219SUV3-like helicase. (784 aa)
fastkd1FAST kinase domains 1. (831 aa)
fastkd2FAST kinase domains 2. (667 aa)
slirpSRA stem-loop interacting RNA binding protein. (99 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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