STRINGSTRING
UBL5 UBL5 I3IUQ0_ORENI I3IUQ0_ORENI LOC100702944 LOC100702944 dhx9 dhx9 LOC100703771 LOC100703771 gpatch2 gpatch2 prpf39 prpf39 snw1 snw1 yju2 yju2 LOC100702978 LOC100702978 snrnp48 snrnp48 SMU1 SMU1 I3J129_ORENI I3J129_ORENI luc7l3 luc7l3 dhx16 dhx16 fam32a fam32a nkap nkap sf3b4 sf3b4 ccdc12 ccdc12 txnl4b txnl4b cwc25 cwc25 GPR149 GPR149 dhx36 dhx36 WDR25 WDR25 snrpa snrpa lg14h19orf54 lg14h19orf54 LOC100699690 LOC100699690 wdr53 wdr53 snrpd3 snrpd3 rbm5 rbm5 paxbp1 paxbp1 bud13 bud13 LOC100691810 LOC100691810 LOC100701998 LOC100701998 ddx21 ddx21 ENSONIP00000006996 ENSONIP00000006996 daw1 daw1 I3JF27_ORENI I3JF27_ORENI prpf31 prpf31 leng1 leng1 snrpb2 snrpb2 Cwc22 Cwc22 sde2 sde2 dhx29 dhx29 prpf38a prpf38a I3JML8_ORENI I3JML8_ORENI prpf8 prpf8 srrm1 srrm1 Wbp11 Wbp11 LOC100696985 LOC100696985 prpf40a prpf40a fam50a fam50a ctnnbl1 ctnnbl1 bcas2 bcas2 pprc1 pprc1 LOC100699175 LOC100699175 dhx30 dhx30 cd2bp2 cd2bp2 SUGP1 SUGP1 cactin cactin sf3a3 sf3a3 snrnp200 snrnp200 sf3a1 sf3a1 sf3b3 sf3b3 ppil4 ppil4 Snrpa1 Snrpa1 LOC100694339 LOC100694339 Wbp4 Wbp4 ddx59 ddx59 dqx1 dqx1 prpf4 prpf4 SRRM3 SRRM3 u2af2 u2af2 rbm22 rbm22 sf3b2 sf3b2 rbm41 rbm41 usp39 usp39 cdc40 cdc40 tfip11 tfip11 sf3b1 sf3b1 Zmat5 Zmat5 WDR70 WDR70 ppil1 ppil1 LOC100707927 LOC100707927 pinx1 pinx1 cwc27 cwc27 snrnp27 snrnp27 ppp1r10 ppp1r10 SNIP1 SNIP1 LOC100712087 LOC100712087 LOC100711061 LOC100711061 gpkow gpkow LOC100700589 LOC100700589 ddx46 ddx46 lsm11 lsm11 parpbp parpbp I3KN33_ORENI I3KN33_ORENI dhx8 dhx8 DDX5 DDX5 ccar1 ccar1 lrmda lrmda LOC100696120 LOC100696120 I3KV64_ORENI I3KV64_ORENI GPATCH2L GPATCH2L sf3b5 sf3b5 LSM10 LSM10 prkrip1 prkrip1 SART1 SART1 lg7hxorf56 lg7hxorf56 snrnp35 snrnp35 ZNF830 ZNF830 slu7 slu7 lg12h9orf78 lg12h9orf78 pnisr pnisr luc7l luc7l ENSONIP00000036646 ENSONIP00000036646 prpf3 prpf3 ppwd1 ppwd1 prpf6 prpf6 txnl4a txnl4a ENSONIP00000038061 ENSONIP00000038061 mfap1 mfap1 dhx34 dhx34 ddx23 ddx23 LOC100706293 LOC100706293 ENSONIP00000040643 ENSONIP00000040643 ppil3 ppil3 sf3a2 sf3a2 LOC100709718 LOC100709718 prpf19 prpf19 xab2 xab2 ENSONIP00000045172 ENSONIP00000045172 rbmx2 rbmx2 LOC100700642 LOC100700642 DDX17 DDX17 I3JAP8_ORENI I3JAP8_ORENI spaca6 spaca6 dhx38 dhx38 prpf4b prpf4b aqr aqr ENSONIP00000052065 ENSONIP00000052065 ENSONIP00000052157 ENSONIP00000052157 DHX15 DHX15 snrnp40 snrnp40 ppie ppie snrpd2 snrpd2 Dhx40 Dhx40 eftud2 eftud2 phf5a phf5a zcchc17 zcchc17 snrpb snrpb sltm sltm LOC100697878 LOC100697878 snrnp25 snrnp25 cwc15 cwc15 Ddx42 Ddx42 Snrpg Snrpg plrg1 plrg1 LOC100696158 LOC100696158 DHX15-2 DHX15-2 LOC100706680 LOC100706680 Snrpf Snrpf snrpd1 snrpd1 pqbp1 pqbp1 prpf18 prpf18 rnpc3 rnpc3 snrpe snrpe I3JSM1_ORENI I3JSM1_ORENI crnkl1 crnkl1 pdcd7 pdcd7 wac wac dhx35 dhx35 Sf1 Sf1 dhx33 dhx33 ENSONIP00000076847 ENSONIP00000076847 syf2 syf2 zcrb1 zcrb1 TCERG1 TCERG1 bud31 bud31 ENSONIP00000078162 ENSONIP00000078162 ENSONIP00000078322 ENSONIP00000078322 I3KMX6_ORENI I3KMX6_ORENI cdc5l cdc5l rnf113a rnf113a ppil2 ppil2 sf3b6 sf3b6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBL5Ubiquitin like 5. (73 aa)
I3IUQ0_ORENIISY1 splicing factor homolog. (250 aa)
LOC100702944Uncharacterized protein. (499 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1288 aa)
LOC100703771DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (745 aa)
gpatch2G-patch domain-containing protein. (530 aa)
prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast). (778 aa)
snw1SNW domain containing 1. (536 aa)
yju2YJU2 splicing factor homolog. (344 aa)
LOC100702978Src homology 2 domain containing transforming protein D, a. (406 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (342 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
I3J129_ORENIPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (184 aa)
luc7l3LUC7-like 3 pre-mRNA splicing factor. (491 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1055 aa)
fam32aFamily with sequence similarity 32 member A. (113 aa)
nkapNFKB activating protein. (408 aa)
sf3b4Splicing factor 3b, subunit 4. (421 aa)
ccdc12Coiled-coil domain containing 12. (163 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
cwc25CWC25 spliceosome associated protein homolog. (403 aa)
GPR149G protein-coupled receptor 149. (727 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1064 aa)
WDR25WD repeat domain 25. (503 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (282 aa)
lg14h19orf54Zgc:153119. (298 aa)
LOC100699690Uncharacterized protein. (951 aa)
wdr53WD repeat domain 53. (386 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
rbm5RNA binding motif protein 5. (857 aa)
paxbp1PAX3 and PAX7 binding protein 1. (914 aa)
bud13BUD13 homolog. (596 aa)
LOC100691810Zgc:163098. (918 aa)
LOC100701998Si:ch211-114c17.1. (724 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (812 aa)
ENSONIP00000006996Nuclear speckle splicing regulatory protein 1. (344 aa)
daw1WD_REPEATS_REGION domain-containing protein. (415 aa)
I3JF27_ORENIRNA binding motif protein 25b. (609 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (482 aa)
leng1Leukocyte receptor cluster (LRC) member 1. (276 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (218 aa)
Cwc22MI domain-containing protein. (1025 aa)
sde2SDE2 telomere maintenance homolog (S. pombe). (416 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1376 aa)
prpf38aPre-mRNA processing factor 38A. (309 aa)
I3JML8_ORENIRNA binding motif protein 42. (377 aa)
prpf8Pre-mRNA processing factor 8. (2350 aa)
srrm1Serine/arginine repetitive matrix 1. (867 aa)
Wbp11WW domain binding protein 11. (694 aa)
LOC100696985HIV-1 Tat specific factor 1. (452 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (879 aa)
fam50aFamily with sequence similarity 50 member A. (370 aa)
ctnnbl1Catenin, beta like 1. (577 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
pprc1PPARG related coactivator 1. (1336 aa)
LOC100699175RRM domain-containing protein. (451 aa)
dhx30DEAH (Asp-Glu-Ala-His) box helicase 30. (1156 aa)
cd2bp2CD2 (cytoplasmic tail) binding protein 2. (375 aa)
SUGP1SURP and G-patch domain containing 1. (636 aa)
cactinCactin. (875 aa)
sf3a3Splicing factor 3a, subunit 3. (501 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
sf3a1Splicing factor 3a, subunit 1. (785 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (470 aa)
Snrpa1Small nuclear ribonucleoprotein polypeptide A. (291 aa)
LOC100694339RNA binding motif protein 10. (747 aa)
Wbp4Uncharacterized protein. (398 aa)
ddx59DEAD (Asp-Glu-Ala-Asp) box polypeptide 59. (638 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (817 aa)
prpf4PRP4 pre-mRNA processing factor 4 homolog (yeast). (523 aa)
SRRM3Serine/arginine repetitive matrix protein 3 isoform X1. (647 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (486 aa)
rbm22RNA binding motif protein 22. (427 aa)
sf3b2Splicing factor 3b, subunit 2. (871 aa)
rbm41RNA binding motif protein 41. (449 aa)
usp39Ubiquitin specific peptidase 39. (501 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)
sf3b1Splicing factor 3b, subunit 1. (1311 aa)
Zmat5Zinc finger, matrin-type 5. (175 aa)
WDR70WD repeat domain 70. (651 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (202 aa)
LOC100707927SMU1 DNA replication regulator and spliceosomal factor b. (525 aa)
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (380 aa)
cwc27CWC27 spliceosome associated cyclophilin. (482 aa)
snrnp27Small nuclear ribonucleoprotein 27 (U4/U6.U5). (160 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (808 aa)
SNIP1Smad nuclear interacting protein 1. (376 aa)
LOC100712087Uncharacterized protein. (182 aa)
LOC100711061tRNA selenocysteine 1 associated protein 1b. (340 aa)
gpkowG patch domain and KOW motifs. (559 aa)
LOC100700589GC-rich sequence DNA-binding factor 2. (879 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1181 aa)
lsm11LSM11, U7 small nuclear RNA associated. (338 aa)
parpbpPARP1 binding protein. (610 aa)
I3KN33_ORENIZinc finger, matrin-type 2. (200 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1213 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (675 aa)
ccar1Cell division cycle and apoptosis regulator 1. (1145 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
LOC100696120WW domain-containing protein. (526 aa)
I3KV64_ORENIUncharacterized protein. (196 aa)
GPATCH2LG-patch domain containing 2 like. (489 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LSM10LSM10, U7 small nuclear RNA associated. (121 aa)
prkrip1PRKR interacting protein 1. (135 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (769 aa)
lg7hxorf56Zgc:103697. (267 aa)
snrnp35Small nuclear ribonucleoprotein 35 (U11/U12). (237 aa)
ZNF830Zinc finger protein 830. (451 aa)
slu7SLU7 homolog, splicing factor. (570 aa)
lg12h9orf78Zgc:103692. (291 aa)
pnisrPNN-interacting serine/arginine-rich protein. (826 aa)
luc7lLUC7-like (S. cerevisiae). (369 aa)
ENSONIP00000036646annotation not available (67 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (711 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (643 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (1070 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ENSONIP00000038061annotation not available (358 aa)
mfap1Microfibril associated protein 1. (452 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1172 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (834 aa)
LOC100706293Leucine rich repeat containing 51. (263 aa)
ENSONIP00000040643CWF19 like cell cycle control factor 2. (788 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
LOC100709718DEAH (Asp-Glu-Ala-His) box helicase 15. (751 aa)
prpf19Pre-mRNA processing factor 19. (1489 aa)
xab2XPA binding protein 2. (854 aa)
ENSONIP00000045172Receptor-type tyrosine-protein phosphatase-like. (163 aa)
rbmx2RRM domain-containing protein. (71 aa)
LOC100700642RNA binding motif protein 25a. (815 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (652 aa)
I3JAP8_ORENItRNA selenocysteine 1 associated protein 1a. (319 aa)
spaca6Sperm acrosome membrane-associated protein 6 isoform X1. (331 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1261 aa)
prpf4bPre-mRNA processing factor 4Bb. (1020 aa)
aqrAquarius intron-binding spliceosomal factor. (1473 aa)
ENSONIP00000052065annotation not available (164 aa)
ENSONIP00000052157annotation not available (201 aa)
DHX15DEAH-box helicase 15. (286 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (309 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
Dhx40DEAH (Asp-Glu-Ala-His) box polypeptide 40. (763 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (1011 aa)
phf5aPHD finger protein 5A. (110 aa)
zcchc17Zinc finger, CCHC domain containing 17. (246 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (256 aa)
sltmSAFB-like, transcription modulator. (995 aa)
LOC100697878Zgc:158803. (498 aa)
snrnp25Small nuclear ribonucleoprotein 25. (187 aa)
cwc15CWC15 spliceosome associated protein homolog. (237 aa)
Ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (926 aa)
SnrpgSmall nuclear ribonucleoprotein G. (76 aa)
plrg1Pleiotropic regulator 1. (513 aa)
LOC100696158Transmembrane 6 superfamily member 2. (401 aa)
DHX15-2DEAH-box helicase 15. (775 aa)
LOC100706680Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1. (1167 aa)
SnrpfSmall nuclear ribonucleoprotein F. (85 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (110 aa)
pqbp1Polyglutamine binding protein 1. (235 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (602 aa)
snrpeSmall nuclear ribonucleoprotein E. (92 aa)
I3JSM1_ORENISerine/arginine repetitive matrix 2. (1331 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (758 aa)
pdcd7Programmed cell death 7. (525 aa)
wacWW domain containing adaptor with coiled-coil a. (563 aa)
dhx35DEAH-box helicase 35. (706 aa)
Sf1Splicing factor 1. (652 aa)
dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (681 aa)
ENSONIP00000076847Cell division cycle 5-like protein. (335 aa)
syf2SYF2 pre-mRNA-splicing factor. (239 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (252 aa)
TCERG1Transcription elongation regulator 1. (1027 aa)
bud31BUD31 homolog. (144 aa)
ENSONIP00000078162Putative ATP-dependent RNA helicase DHX30. (529 aa)
ENSONIP00000078322Uncharacterized protein LOC102080180. (143 aa)
I3KMX6_ORENIIK cytokine. (535 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (882 aa)
rnf113aRing finger protein 113A. (322 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (538 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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