STRINGSTRING
smpd1 smpd1 smpd3 smpd3 LOC100697094 LOC100697094 smpd2 smpd2 smpd4 smpd4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (602 aa)
smpd3Sphingomyelin phosphodiesterase 3, neutral. (699 aa)
LOC100697094PAP2_C domain-containing protein. (382 aa)
smpd2Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase). (443 aa)
smpd4Sphingomyelin phosphodiesterase 4. (846 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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