12 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100695842	Calpain small subunit 1. (216 aa)
	I3JDJ8_ORENI	Uncharacterized protein; Belongs to the peptidase C2 family. (438 aa)
	I3JNF9_ORENI	Zgc:136872; Belongs to the peptidase C2 family. (708 aa)
	I3JNG1_ORENI	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (487 aa)
	LOC100696988	Zgc:55262; Belongs to the peptidase C2 family. (711 aa)
	GCA	Grancalcin. (240 aa)
	LOC100700838	Calpain, small subunit 1 b. (216 aa)
	cast	Calpastatin isoform X5. (1116 aa)
	capn10	Calpain 10; Belongs to the peptidase C2 family. (694 aa)
	ENSONIP00000078172	annotation not available (600 aa)
	LOC100709916	Calpain 5a; Belongs to the peptidase C2 family. (657 aa)
	CAPN6	Calpain 6; Belongs to the peptidase C2 family. (660 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPN6	LOC100695842	ENSONIP00000080408	ENSONIP00000001564	Calpain 6; Belongs to the peptidase C2 family.	Calpain small subunit 1.	0.734
CAPN6	LOC100700838	ENSONIP00000080408	ENSONIP00000036942	Calpain 6; Belongs to the peptidase C2 family.	Calpain, small subunit 1 b.	0.790
CAPN6	cast	ENSONIP00000080408	ENSONIP00000038617	Calpain 6; Belongs to the peptidase C2 family.	Calpastatin isoform X5.	0.633
ENSONIP00000078172	LOC100695842	ENSONIP00000078172	ENSONIP00000001564	annotation not available	Calpain small subunit 1.	0.766
ENSONIP00000078172	LOC100700838	ENSONIP00000078172	ENSONIP00000036942	annotation not available	Calpain, small subunit 1 b.	0.775
ENSONIP00000078172	cast	ENSONIP00000078172	ENSONIP00000038617	annotation not available	Calpastatin isoform X5.	0.665
GCA	cast	ENSONIP00000023020	ENSONIP00000038617	Grancalcin.	Calpastatin isoform X5.	0.614
I3JDJ8_ORENI	LOC100695842	ENSONIP00000006938	ENSONIP00000001564	Uncharacterized protein; Belongs to the peptidase C2 family.	Calpain small subunit 1.	0.816
I3JDJ8_ORENI	LOC100700838	ENSONIP00000006938	ENSONIP00000036942	Uncharacterized protein; Belongs to the peptidase C2 family.	Calpain, small subunit 1 b.	0.826
I3JDJ8_ORENI	cast	ENSONIP00000006938	ENSONIP00000038617	Uncharacterized protein; Belongs to the peptidase C2 family.	Calpastatin isoform X5.	0.551
I3JNF9_ORENI	LOC100695842	ENSONIP00000010403	ENSONIP00000001564	Zgc:136872; Belongs to the peptidase C2 family.	Calpain small subunit 1.	0.611
I3JNF9_ORENI	LOC100700838	ENSONIP00000010403	ENSONIP00000036942	Zgc:136872; Belongs to the peptidase C2 family.	Calpain, small subunit 1 b.	0.611
I3JNF9_ORENI	cast	ENSONIP00000010403	ENSONIP00000038617	Zgc:136872; Belongs to the peptidase C2 family.	Calpastatin isoform X5.	0.665
I3JNG1_ORENI	LOC100695842	ENSONIP00000010405	ENSONIP00000001564	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain small subunit 1.	0.842
I3JNG1_ORENI	LOC100700838	ENSONIP00000010405	ENSONIP00000036942	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpain, small subunit 1 b.	0.853
I3JNG1_ORENI	cast	ENSONIP00000010405	ENSONIP00000038617	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	Calpastatin isoform X5.	0.665
LOC100695842	CAPN6	ENSONIP00000001564	ENSONIP00000080408	Calpain small subunit 1.	Calpain 6; Belongs to the peptidase C2 family.	0.734
LOC100695842	ENSONIP00000078172	ENSONIP00000001564	ENSONIP00000078172	Calpain small subunit 1.	annotation not available	0.766
LOC100695842	I3JDJ8_ORENI	ENSONIP00000001564	ENSONIP00000006938	Calpain small subunit 1.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.816
LOC100695842	I3JNF9_ORENI	ENSONIP00000001564	ENSONIP00000010403	Calpain small subunit 1.	Zgc:136872; Belongs to the peptidase C2 family.	0.611