(34 nodes) Mixed, incl. Regulation of viral genome replication, and STAT family protein binding network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100700930	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family. (375 aa)
	I3IUL8_ORENI	Poly [ADP-ribose] polymerase. (499 aa)
	rsad2	Radical S-adenosyl methionine domain containing 2. (354 aa)
	LOC100704951	Poly [ADP-ribose] polymerase. (1792 aa)
	znfx1	Zinc finger, NFX1-type containing 1. (1953 aa)
	LOC100691607	Uncharacterized protein. (693 aa)
	I3JV01_ORENI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)
	mavs	CARD_2 domain-containing protein. (552 aa)
	LOC100698331	zf-3CxxC domain-containing protein. (159 aa)
	LOC100710944	zf-3CxxC domain-containing protein. (158 aa)
	I3K4G6_ORENI	RING-type domain-containing protein. (3990 aa)
	LOC109194892	Interferon-induced protein 44-like. (457 aa)
	I3K5H7_ORENI	SAM domain-containing protein. (1632 aa)
	LOC100704115	Si:dkey-3h3.3. (427 aa)
	LOC100701136	TLDc domain-containing protein. (478 aa)
	hectd2	HECT domain containing 2. (762 aa)
	LOC102079419	Uncharacterized protein. (486 aa)
	I3KMR2_ORENI	Uncharacterized protein. (487 aa)
	LOC100698117	Family with sequence similarity 162 member A. (165 aa)
	LOC100697587	HECT domain-containing protein. (315 aa)
	adar	Adenosine deaminase RNA specific. (1363 aa)
	I3J9Y9_ORENI	Poly(ADP-ribose) polymerase family member 9. (288 aa)
	xaf1	XIAP associated factor 1. (279 aa)
	LOC100710945	TLDc domain-containing protein. (532 aa)
	ENSONIP00000048657	Interferon-induced protein with tetratricopeptide repeats 1-like. (306 aa)
	dhx58	Probable ATP-dependent RNA helicase DHX58. (713 aa)
	dtx3	Zgc:66440. (369 aa)
	epsti1	Epithelial-stromal interaction protein 1 isoform X2. (330 aa)
	ifih1	Interferon induced with helicase C domain 1. (1036 aa)
	I3KSM2_ORENI	RING-type domain-containing protein. (301 aa)
	ENSONIP00000065628	annotation not available (443 aa)
	LOC100694656	Poly [ADP-ribose] polymerase. (1954 aa)
	LOC100709769	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (671 aa)
	rnf213	Ring finger protein 213a. (4290 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000048657	LOC100700930	ENSONIP00000048657	ENSONIP00000000016	Interferon-induced protein with tetratricopeptide repeats 1-like.	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	0.552
ENSONIP00000048657	LOC100709769	ENSONIP00000048657	ENSONIP00000069351	Interferon-induced protein with tetratricopeptide repeats 1-like.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.446
ENSONIP00000048657	ifih1	ENSONIP00000048657	ENSONIP00000059635	Interferon-induced protein with tetratricopeptide repeats 1-like.	Interferon induced with helicase C domain 1.	0.500
ENSONIP00000048657	rsad2	ENSONIP00000048657	ENSONIP00000004603	Interferon-induced protein with tetratricopeptide repeats 1-like.	Radical S-adenosyl methionine domain containing 2.	0.525
ENSONIP00000065628	LOC100700930	ENSONIP00000065628	ENSONIP00000000016	annotation not available	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	0.671
ENSONIP00000065628	LOC100701136	ENSONIP00000065628	ENSONIP00000017786	annotation not available	TLDc domain-containing protein.	0.460
ENSONIP00000065628	LOC100709769	ENSONIP00000065628	ENSONIP00000069351	annotation not available	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.737
ENSONIP00000065628	LOC100710945	ENSONIP00000065628	ENSONIP00000041617	annotation not available	TLDc domain-containing protein.	0.460
ENSONIP00000065628	LOC109194892	ENSONIP00000065628	ENSONIP00000016046	annotation not available	Interferon-induced protein 44-like.	0.460
ENSONIP00000065628	adar	ENSONIP00000065628	ENSONIP00000030791	annotation not available	Adenosine deaminase RNA specific.	0.545
ENSONIP00000065628	dhx58	ENSONIP00000065628	ENSONIP00000051536	annotation not available	Probable ATP-dependent RNA helicase DHX58.	0.575
ENSONIP00000065628	ifih1	ENSONIP00000065628	ENSONIP00000059635	annotation not available	Interferon induced with helicase C domain 1.	0.575
ENSONIP00000065628	mavs	ENSONIP00000065628	ENSONIP00000015464	annotation not available	CARD_2 domain-containing protein.	0.433
ENSONIP00000065628	rsad2	ENSONIP00000065628	ENSONIP00000004603	annotation not available	Radical S-adenosyl methionine domain containing 2.	0.762
ENSONIP00000065628	xaf1	ENSONIP00000065628	ENSONIP00000038723	annotation not available	XIAP associated factor 1.	0.565
I3IUL8_ORENI	I3J9Y9_ORENI	ENSONIP00000000308	ENSONIP00000035423	Poly [ADP-ribose] polymerase.	Poly(ADP-ribose) polymerase family member 9.	0.437
I3IUL8_ORENI	I3K4G6_ORENI	ENSONIP00000000308	ENSONIP00000016012	Poly [ADP-ribose] polymerase.	RING-type domain-containing protein.	0.529
I3IUL8_ORENI	I3KSM2_ORENI	ENSONIP00000000308	ENSONIP00000064964	Poly [ADP-ribose] polymerase.	RING-type domain-containing protein.	0.732
I3IUL8_ORENI	LOC100698117	ENSONIP00000000308	ENSONIP00000027976	Poly [ADP-ribose] polymerase.	Family with sequence similarity 162 member A.	0.437
I3IUL8_ORENI	LOC100700930	ENSONIP00000000308	ENSONIP00000000016	Poly [ADP-ribose] polymerase.	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	0.454