(78 nodes) Homeobox network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Irx3	Iroquois homeobox 3a. (433 aa)
	LOC100692377	Homeobox A11b. (277 aa)
	LOC100692649	Homeobox A10b. (349 aa)
	LOC100692920	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
	LOC100534423	Homeobox A2b. (362 aa)
	lhx6	LIM homeobox 6. (375 aa)
	I3JA92_ORENI	Homeobox A1a. (323 aa)
	LOC100534422	Homeobox domain-containing protein. (358 aa)
	hoxa3	Homeobox A4a. (421 aa)
	LOC100534462	Homeobox A4. (247 aa)
	hoxa5	Homeobox A5a. (281 aa)
	HOXA7	Homeobox A7. (228 aa)
	LOC100695489	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (264 aa)
	hoxa10	Homeobox domain-containing protein. (378 aa)
	hoxa11	Homeobox A11a. (299 aa)
	LOC100709512	Homeobox B13a. (308 aa)
	hoxb9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (283 aa)
	LOC100534461	Homeobox B3a. (486 aa)
	LOC100703437	Homeobox domain-containing protein. (258 aa)
	LOC100707272	Iroquois homeobox 1a. (495 aa)
	LOC100705673	Homeobox domain-containing protein. (413 aa)
	hoxd3	Homeobox D3a. (399 aa)
	Hoxd4	Homeobox D4a. (230 aa)
	hoxd10	Homeobox D10a. (340 aa)
	LOC100704063	Pre-B-cell leukemia homeobox 2. (402 aa)
	dlx1	Distal-less homeobox 1a. (253 aa)
	MAZ	MYC associated zinc finger protein. (531 aa)
	LOC100704482	Pre-B-cell leukemia homeobox 1a. (438 aa)
	hoxc11	Homeobox C11a. (367 aa)
	LOC100690382	Homeobox C10a. (331 aa)
	hoxc9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (262 aa)
	hoxc8	Homeobox C8a. (250 aa)
	hoxc6	Homeobox C6a. (234 aa)
	LOC100534464	Homeobox C5a. (227 aa)
	hoxc4	Homeobox C4a. (265 aa)
	I3K2S5_ORENI	Homeobox domain-containing protein. (219 aa)
	LOC100695958	Ladybird homeobox 1a. (263 aa)
	dipk1c	Divergent protein kinase domain 1C. (480 aa)
	I3KHI1_ORENI	Homeobox domain-containing protein. (360 aa)
	LOC100710680	Myeloid ecotropic viral integration site 3. (418 aa)
	pknox1	Pbx/knotted 1 homeobox 1.1. (451 aa)
	hoxb1	Homeobox B1b. (286 aa)
	LOC100534493	Growth differentiation factor 11. (389 aa)
	I3JG03_ORENI	Homeobox domain-containing protein. (269 aa)
	hoxa13	Homeobox A13a. (299 aa)
	LOC100697470	Teashirt zinc finger homeobox 3b. (1224 aa)
	LOC100702637	Homeobox B6b. (235 aa)
	irx6	Iroquois homeobox 6a. (498 aa)
	pknox2	Pbx/knotted 1 homeobox 2. (488 aa)
	LOC100703326	Homeobox protein TGIF2. (578 aa)
	ENSONIP00000039320	annotation not available (250 aa)
	hoxd9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (271 aa)
	hoxd11	Homeobox D11a. (278 aa)
	ENSONIP00000045636	Ligand-dependent corepressor. (495 aa)
	LOC100698401	Homeobox B4a. (258 aa)
	hoxd12	Homeobox D12a. (262 aa)
	LOC100534467	Homeobox domain-containing protein. (248 aa)
	Hoxb5	Homeobox B5b. (316 aa)
	LOC100705918	TGFB-induced factor homeobox 1. (330 aa)
	EBF1	EBF transcription factor 1. (671 aa)
	I3JI97_ORENI	Homeobox domain-containing protein. (416 aa)
	irx2	Iroquois homeobox 2a. (511 aa)
	LOC100711709	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (308 aa)
	I3J0F5_ORENI	Pre-B-cell leukemia transcription factor 4. (438 aa)
	ENSONIP00000062889	Homeobox protein Hox-B1a-like. (391 aa)
	I3JG07_ORENI	Homeobox B2a. (416 aa)
	hoxb8	Homeobox B8a. (280 aa)
	meis2	Meis homeobox 2a. (480 aa)
	LOC100697339	Homeobox domain-containing protein. (327 aa)
	dlx2	Distal-less homeobox 2b. (276 aa)
	I3KPC3_ORENI	Homeobox domain-containing protein. (355 aa)
	pbx3	Homeobox domain-containing protein. (441 aa)
	hoxb3	Homeobox protein Hox-B3 isoform X1. (284 aa)
	meis1	Meis homeobox 1 b. (387 aa)
	LOC100699739	Homeobox domain-containing protein. (468 aa)
	Gbx2	Gastrulation brain homeobox 2. (337 aa)
	LOC100690952	Meis homeobox 2b. (431 aa)
	LOC100697602	Homeobox domain-containing protein. (284 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EBF1	LOC100692377	ENSONIP00000055743	ENSONIP00000003712	EBF transcription factor 1.	Homeobox A11b.	0.476
EBF1	LOC100705918	ENSONIP00000055743	ENSONIP00000055547	EBF transcription factor 1.	TGFB-induced factor homeobox 1.	0.486
EBF1	hoxa11	ENSONIP00000055743	ENSONIP00000005792	EBF transcription factor 1.	Homeobox A11a.	0.476
EBF1	meis1	ENSONIP00000055743	ENSONIP00000074479	EBF transcription factor 1.	Meis homeobox 1 b.	0.497
ENSONIP00000039320	LOC100695489	ENSONIP00000039320	ENSONIP00000005788	annotation not available	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.438
ENSONIP00000062889	I3J0F5_ORENI	ENSONIP00000062889	ENSONIP00000060795	Homeobox protein Hox-B1a-like.	Pre-B-cell leukemia transcription factor 4.	0.718
ENSONIP00000062889	I3KHI1_ORENI	ENSONIP00000062889	ENSONIP00000020576	Homeobox protein Hox-B1a-like.	Homeobox domain-containing protein.	0.718
ENSONIP00000062889	LOC100699739	ENSONIP00000062889	ENSONIP00000075834	Homeobox protein Hox-B1a-like.	Homeobox domain-containing protein.	0.718
ENSONIP00000062889	LOC100704063	ENSONIP00000062889	ENSONIP00000010876	Homeobox protein Hox-B1a-like.	Pre-B-cell leukemia homeobox 2.	0.736
ENSONIP00000062889	LOC100704482	ENSONIP00000062889	ENSONIP00000012308	Homeobox protein Hox-B1a-like.	Pre-B-cell leukemia homeobox 1a.	0.718
ENSONIP00000062889	LOC100710680	ENSONIP00000062889	ENSONIP00000020927	Homeobox protein Hox-B1a-like.	Myeloid ecotropic viral integration site 3.	0.560
ENSONIP00000062889	pbx3	ENSONIP00000062889	ENSONIP00000070429	Homeobox protein Hox-B1a-like.	Homeobox domain-containing protein.	0.718
ENSONIP00000062889	pknox1	ENSONIP00000062889	ENSONIP00000021967	Homeobox protein Hox-B1a-like.	Pbx/knotted 1 homeobox 1.1.	0.640
ENSONIP00000062889	pknox2	ENSONIP00000062889	ENSONIP00000035432	Homeobox protein Hox-B1a-like.	Pbx/knotted 1 homeobox 2.	0.558
Gbx2	Irx3	ENSONIP00000076506	ENSONIP00000003520	Gastrulation brain homeobox 2.	Iroquois homeobox 3a.	0.556
HOXA7	Hoxb5	ENSONIP00000005787	ENSONIP00000054409	Homeobox A7.	Homeobox B5b.	0.699
HOXA7	Hoxd4	ENSONIP00000005787	ENSONIP00000010827	Homeobox A7.	Homeobox D4a.	0.668
HOXA7	I3J0F5_ORENI	ENSONIP00000005787	ENSONIP00000060795	Homeobox A7.	Pre-B-cell leukemia transcription factor 4.	0.444
HOXA7	I3JG03_ORENI	ENSONIP00000005787	ENSONIP00000028119	Homeobox A7.	Homeobox domain-containing protein.	0.688
HOXA7	I3KHI1_ORENI	ENSONIP00000005787	ENSONIP00000020576	Homeobox A7.	Homeobox domain-containing protein.	0.444