STRINGSTRING
LOC100691722 LOC100691722 smarca4 smarca4 arid2 arid2 smarcd2 smarcd2 smarcc2 smarcc2 smarce1 smarce1 smarcd1 smarcd1 brd7 brd7 LOC100704433 LOC100704433 smarcc1 smarcc1 LOC100704669 LOC100704669 I3JG14_ORENI I3JG14_ORENI LOC100699288 LOC100699288 phf10 phf10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100691722SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
arid2AT rich interactive domain 2 (ARID, RFX-like). (1688 aa)
smarcd2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (501 aa)
smarcc2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
smarcd1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
brd7Bromodomain containing 7. (614 aa)
LOC100704433Polybromo 1, like. (1657 aa)
smarcc1Uncharacterized protein. (1138 aa)
LOC100704669SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
I3JG14_ORENISWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
LOC100699288SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
phf10PHD finger protein 10. (516 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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