19 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl30	Ribosomal protein L30. (116 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (128 aa)
	rps10	Ribosomal protein S10. (168 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
	I3J2M6_ORENI	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (151 aa)
	rpl24	Ribosomal protein L24. (432 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (94 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (224 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	Rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (225 aa)
	Rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (207 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (253 aa)
	rps13	Small subunit ribosomal protein S13e. (151 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	ENSONIP00000074793	Small subunit ribosomal protein S17e. (182 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (298 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	RPS29	Ribosomal protein S29. (60 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000074793	I3J2M6_ORENI	ENSONIP00000074793	ENSONIP00000029087	Small subunit ribosomal protein S17e.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
ENSONIP00000074793	RPS29	ENSONIP00000074793	ENSONIP00000079945	Small subunit ribosomal protein S17e.	Ribosomal protein S29.	0.999
ENSONIP00000074793	Rpl12	ENSONIP00000074793	ENSONIP00000050984	Small subunit ribosomal protein S17e.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSONIP00000074793	Rps7	ENSONIP00000074793	ENSONIP00000054807	Small subunit ribosomal protein S17e.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
ENSONIP00000074793	rpl18a	ENSONIP00000074793	ENSONIP00000042922	Small subunit ribosomal protein S17e.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
ENSONIP00000074793	rpl24	ENSONIP00000074793	ENSONIP00000035880	Small subunit ribosomal protein S17e.	Ribosomal protein L24.	0.999
ENSONIP00000074793	rpl30	ENSONIP00000074793	ENSONIP00000003346	Small subunit ribosomal protein S17e.	Ribosomal protein L30.	0.999
ENSONIP00000074793	rps10	ENSONIP00000074793	ENSONIP00000018563	Small subunit ribosomal protein S17e.	Ribosomal protein S10.	0.999
ENSONIP00000074793	rps13	ENSONIP00000074793	ENSONIP00000068795	Small subunit ribosomal protein S17e.	Small subunit ribosomal protein S13e.	0.999
ENSONIP00000074793	rps21	ENSONIP00000074793	ENSONIP00000040171	Small subunit ribosomal protein S17e.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
ENSONIP00000074793	rps24	ENSONIP00000074793	ENSONIP00000073311	Small subunit ribosomal protein S17e.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
ENSONIP00000074793	rps25	ENSONIP00000074793	ENSONIP00000006833	Small subunit ribosomal protein S17e.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
ENSONIP00000074793	rps26	ENSONIP00000074793	ENSONIP00000024003	Small subunit ribosomal protein S17e.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ENSONIP00000074793	rps4x	ENSONIP00000074793	ENSONIP00000078151	Small subunit ribosomal protein S17e.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
ENSONIP00000074793	rps5	ENSONIP00000074793	ENSONIP00000044853	Small subunit ribosomal protein S17e.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
ENSONIP00000074793	rps6	ENSONIP00000074793	ENSONIP00000079681	Small subunit ribosomal protein S17e.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
ENSONIP00000074793	rps8	ENSONIP00000074793	ENSONIP00000068544	Small subunit ribosomal protein S17e.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
ENSONIP00000074793	rps9	ENSONIP00000074793	ENSONIP00000049626	Small subunit ribosomal protein S17e.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
I3J2M6_ORENI	ENSONIP00000074793	ENSONIP00000029087	ENSONIP00000074793	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Small subunit ribosomal protein S17e.	0.999
I3J2M6_ORENI	RPS29	ENSONIP00000029087	ENSONIP00000079945	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein S29.	0.999