STRINGSTRING
wdr74 wdr74 Ppan Ppan Mdn1 Mdn1 ftsj3 ftsj3 noc2l noc2l Lsg1 Lsg1 znf593 znf593 nsun6 nsun6 rpf1 rpf1 Brix1 Brix1 ddx18 ddx18 nol12 nol12 cep152 cep152 nop9 nop9 surf6 surf6 LOC100711208 LOC100711208 znf622 znf622 pum3 pum3 grwd1 grwd1 Nop2 Nop2 wdr12 wdr12 mrto4 mrto4 ddx55 ddx55 gnl2 gnl2 nop53 nop53 gtpbp4 gtpbp4 pak1ip1 pak1ip1 eif6 eif6 Cebpz Cebpz gnl3 gnl3 ddx27 ddx27 Rsl1d1 Rsl1d1 I3KYP4_ORENI I3KYP4_ORENI LOC100711132 LOC100711132 nsa2 nsa2 nmd3 nmd3 LOC100690727 LOC100690727 gnl1 gnl1 ddx56 ddx56 sdad1 sdad1 pwp1 pwp1 pes1 pes1 rpf2 rpf2 Rbm19 Rbm19 nip7 nip7 mak16 mak16 rsl24d1 rsl24d1 rbm34 rbm34 ebna1bp2 ebna1bp2 rbm28 rbm28 ddx31 ddx31 gnl3l gnl3l bop1 bop1 ENSONIP00000076186 ENSONIP00000076186 ddx24 ddx24 pa2g4 pa2g4 noc3l noc3l nle1 nle1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wdr74WD repeat domain 74. (375 aa)
PpanPeter pan homolog. (524 aa)
Mdn1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5480 aa)
ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (858 aa)
noc2lNOC2-like nucleolar associated transcriptional repressor. (750 aa)
Lsg1Large 60S subunit nuclear export GTPase 1. (642 aa)
znf593Zinc finger protein 593. (129 aa)
nsun6NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (462 aa)
rpf1Ribosome production factor 1 homolog. (349 aa)
Brix1Brix domain containing 2. (358 aa)
ddx18RNA helicase. (656 aa)
nol12Nucleolar protein 12. (232 aa)
cep152Centrosomal protein 152. (1664 aa)
nop9Uncharacterized protein. (615 aa)
surf6Surfeit 6. (355 aa)
LOC100711208Proliferation-associated 2G4, b. (392 aa)
znf622Zinc finger protein 622. (472 aa)
pum3Pumilio RNA-binding family member 3. (649 aa)
grwd1Glutamate-rich WD repeat containing 1. (451 aa)
Nop2NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (587 aa)
wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
ddx55RNA helicase. (597 aa)
gnl2Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (732 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (465 aa)
gtpbp4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (635 aa)
pak1ip1PAK1 interacting protein 1. (359 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
CebpzCCAAT enhancer binding protein zeta. (1133 aa)
gnl3Guanine nucleotide binding protein-like 3 (nucleolar). (556 aa)
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. (758 aa)
Rsl1d1Ribosomal L1 domain containing 1. (233 aa)
I3KYP4_ORENIPurinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family. (305 aa)
LOC100711132Nucleolar protein interacting with the FHA domain of MKI67. (285 aa)
nsa2NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (505 aa)
LOC100690727Ribosomal RNA processing 1. (861 aa)
gnl1Guanine nucleotide binding protein-like 1. (623 aa)
ddx56DEAD (Asp-Glu-Ala-Asp) box helicase 56. (560 aa)
sdad1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (707 aa)
pwp1PWP1 homolog, endonuclein. (510 aa)
pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (586 aa)
rpf2Ribosome production factor 2 homolog. (331 aa)
Rbm19RNA binding motif protein 19. (1009 aa)
nip760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (202 aa)
mak16Protein MAK16 homolog; Belongs to the MAK16 family. (306 aa)
rsl24d1Ribosomal L24 domain containing 1. (164 aa)
rbm34RNA binding motif protein 34. (425 aa)
ebna1bp2EBNA1 binding protein 2. (314 aa)
rbm28RNA binding motif protein 28. (772 aa)
ddx31RNA helicase. (689 aa)
gnl3lGuanine nucleotide-binding protein-like 3-like protein isoform X2. (566 aa)
bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (719 aa)
ENSONIP00000076186Ribosomal RNA processing 15 homolog. (332 aa)
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (870 aa)
pa2g4Proliferation-associated 2G4, a. (391 aa)
noc3lNucleolar complex protein 3 homolog. (802 aa)
nle1Notchless homolog 1 (Drosophila). (486 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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