STRINGSTRING
kri1 kri1 dcaf13 dcaf13 tsr2 tsr2 tbl3 tbl3 utp4 utp4 LOC100706520 LOC100706520 ercc2 ercc2 nop9 nop9 tsr1 tsr1 utp6 utp6 bysl bysl heatr1 heatr1 utp25 utp25 nol10 nol10 utp3 utp3 wdr46 wdr46 mrps11 mrps11 ngdn ngdn bms1 bms1 dhx37 dhx37 Rpp40 Rpp40 utp23 utp23 abt1 abt1 wdr43 wdr43 fam207a fam207a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kri1KRI1 homolog. (767 aa)
dcaf13Ddb1 and cul4 associated factor 13. (445 aa)
tsr2TSR2 ribosome maturation factor. (175 aa)
tbl3Transducin (beta)-like 3. (930 aa)
utp4UTP4 small subunit processome component. (690 aa)
LOC100706520PWP2 small subunit processome component. (921 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
nop9Uncharacterized protein. (615 aa)
tsr1TSR1 ribosome maturation factor. (835 aa)
utp6UTP6 small subunit processome component. (595 aa)
byslBystin-like. (435 aa)
heatr1HEAT repeat containing 1. (1911 aa)
utp25UTP25 small subunit processor component. (648 aa)
nol10Nucleolar protein 10. (720 aa)
utp3UTP3 small subunit processome component. (461 aa)
wdr46WD repeat domain 46. (599 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (212 aa)
ngdnNeuroguidin, EIF4E binding protein. (395 aa)
bms1BMS1 ribosome biogenesis factor. (1209 aa)
dhx37DEAH (Asp-Glu-Ala-His) box polypeptide 37. (1150 aa)
Rpp40Ribonuclease P/MRP 40 subunit. (339 aa)
utp23UTP23 small subunit processome component. (270 aa)
abt1Activator of basal transcription 1. (323 aa)
wdr43WD repeat domain 43. (654 aa)
fam207aFamily with sequence similarity 207 member A. (253 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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