23 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	wdr77	WD_REPEATS_REGION domain-containing protein. (334 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (635 aa)
	cfap53	Uncharacterized protein. (521 aa)
	LOC100695871	Caudal type homeobox 1a. (242 aa)
	LOC100708236	Methyl-CpG binding domain protein 2. (266 aa)
	chtop	Chromatin target of PRMT1a. (235 aa)
	LOC100698109	Methyl-CpG binding domain protein 3. (239 aa)
	lrwd1	Leucine-rich repeats and WD repeat domain containing 1. (739 aa)
	zbtb33	Zinc finger and BTB domain containing 33. (721 aa)
	ENSONIP00000079948	Uncharacterized protein LOC109194435 isoform X1. (188 aa)
	LOC100696948	Homeobox domain-containing protein. (324 aa)
	ZBTB21	Zinc finger and BTB domain containing 21. (1052 aa)
	LOC100701661	Methyl-CpG-binding domain protein 3 isoform X1. (297 aa)
	LOC100712281	CXXC finger protein 5a. (181 aa)
	ZBTB38	Zinc finger and BTB domain containing 38. (577 aa)
	ENSONIP00000051958	Enhancer of rudimentary homolog. (110 aa)
	ERH	Enhancer of rudimentary homolog; May have a role in the cell cycle. (171 aa)
	zbtb4	Zinc finger and BTB domain-containing protein 38. (1637 aa)
	LOC102076907	CXXC finger protein 5b. (267 aa)
	LOC102077956	CXXC-type zinc finger protein 5. (413 aa)
	mecp2	Methyl CpG binding protein 2. (1076 aa)
	dnmt1	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1510 aa)
	cxxc4	CXXC finger 4. (289 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000051958	chtop	ENSONIP00000051958	ENSONIP00000013028	Enhancer of rudimentary homolog.	Chromatin target of PRMT1a.	0.699
ERH	chtop	ENSONIP00000051843	ENSONIP00000013028	Enhancer of rudimentary homolog; May have a role in the cell cycle.	Chromatin target of PRMT1a.	0.699
LOC100698109	dnmt1	ENSONIP00000012845	ENSONIP00000029113	Methyl-CpG binding domain protein 3.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.516
LOC100701661	dnmt1	ENSONIP00000065913	ENSONIP00000029113	Methyl-CpG-binding domain protein 3 isoform X1.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.531
LOC100708236	dnmt1	ENSONIP00000015903	ENSONIP00000029113	Methyl-CpG binding domain protein 2.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.531
LOC102077956	cxxc4	ENSONIP00000041363	ENSONIP00000022115	CXXC-type zinc finger protein 5.	CXXC finger 4.	0.900
chtop	ENSONIP00000051958	ENSONIP00000013028	ENSONIP00000051958	Chromatin target of PRMT1a.	Enhancer of rudimentary homolog.	0.699
chtop	ERH	ENSONIP00000013028	ENSONIP00000051843	Chromatin target of PRMT1a.	Enhancer of rudimentary homolog; May have a role in the cell cycle.	0.699
cxxc4	LOC102077956	ENSONIP00000022115	ENSONIP00000041363	CXXC finger 4.	CXXC-type zinc finger protein 5.	0.900
dnmt1	LOC100698109	ENSONIP00000029113	ENSONIP00000012845	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Methyl-CpG binding domain protein 3.	0.516
dnmt1	LOC100701661	ENSONIP00000029113	ENSONIP00000065913	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Methyl-CpG-binding domain protein 3 isoform X1.	0.531
dnmt1	LOC100708236	ENSONIP00000029113	ENSONIP00000015903	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Methyl-CpG binding domain protein 2.	0.531
dnmt1	mecp2	ENSONIP00000029113	ENSONIP00000029287	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Methyl CpG binding protein 2.	0.721
mecp2	dnmt1	ENSONIP00000029287	ENSONIP00000029113	Methyl CpG binding protein 2.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.721
mecp2	zbtb33	ENSONIP00000029287	ENSONIP00000003191	Methyl CpG binding protein 2.	Zinc finger and BTB domain containing 33.	0.561
prmt5	wdr77	ENSONIP00000019552	ENSONIP00000023876	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.999
wdr77	prmt5	ENSONIP00000023876	ENSONIP00000019552	WD_REPEATS_REGION domain-containing protein.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.999
zbtb33	mecp2	ENSONIP00000003191	ENSONIP00000029287	Zinc finger and BTB domain containing 33.	Methyl CpG binding protein 2.	0.561