STRINGSTRING
LOC100695900 LOC100695900 ddx1 ddx1 LOC100706107 LOC100706107 pum1 pum1 rptor rptor dhx36 dhx36 LOC100709775 LOC100709775 stau1 stau1 G3bp1 G3bp1 LOC100699489 LOC100699489 eif2s1 eif2s1 zfand1 zfand1 znfx1 znfx1 caprin1 caprin1 igf2bp2 igf2bp2 casc3 casc3 rc3h1 rc3h1 tial1 tial1 LOC100705812 LOC100705812 larp4 larp4 LOC100690925 LOC100690925 nufip2 nufip2 ythdf3 ythdf3 LOC100703711 LOC100703711 LOC100692547 LOC100692547 mcrip2 mcrip2 LOC100707688 LOC100707688 YTHDF1 YTHDF1 LARP4B LARP4B I3KSH5_ORENI I3KSH5_ORENI LOC100693948 LOC100693948 Lg19h9orf72 Lg19h9orf72 nanos3 nanos3 LOC100703764 LOC100703764 LOC100691393 LOC100691393 g3bp2 g3bp2 LOC100698984 LOC100698984 I3KAX8_ORENI I3KAX8_ORENI I3KPD0_ORENI I3KPD0_ORENI mcrip1 mcrip1 tia1 tia1 ENSONIP00000035932 ENSONIP00000035932 ENSONIP00000038958 ENSONIP00000038958 LOC100697848 LOC100697848 ENSONIP00000039537 ENSONIP00000039537 LOC100707815 LOC100707815 YTHDF1-2 YTHDF1-2 igf2bp3 igf2bp3 kpnb1 kpnb1 ENDOV ENDOV I3JG28_ORENI I3JG28_ORENI ythdf2 ythdf2 Atxn2l Atxn2l pabpc4 pabpc4 I3JFY6_ORENI I3JFY6_ORENI ogfod1 ogfod1 RBPMS RBPMS larp1 larp1 pqbp1 pqbp1 fmr1 fmr1 Stau2 Stau2 LOC100707769 LOC100707769 ddx6 ddx6 I3J3G6_ORENI I3J3G6_ORENI Lsm14a Lsm14a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100695900ELAV-like protein; Belongs to the RRM elav family. (359 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (740 aa)
LOC100706107ELAV-like protein; Belongs to the RRM elav family. (361 aa)
pum1Pumilio RNA-binding family member 1. (1163 aa)
rptorRegulatory associated protein of MTOR, complex 1. (1386 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1064 aa)
LOC100709775Ring finger and CCCH-type domains 2. (1152 aa)
stau1Staufen double-stranded RNA binding protein 1. (703 aa)
G3bp1GTPase activating protein (SH3 domain) binding protein 1. (500 aa)
LOC100699489Uncharacterized protein. (143 aa)
eif2s1Eukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
zfand1Zinc finger, AN1-type domain 1. (269 aa)
znfx1Zinc finger, NFX1-type containing 1. (1953 aa)
caprin1Cell cycle associated protein 1b. (691 aa)
igf2bp2Insulin-like growth factor 2 mRNA binding protein 2a. (611 aa)
casc3Casc3 exon junction complex subunit. (817 aa)
rc3h1Ring finger and CCCH-type domains 1b. (1105 aa)
tial1TIA1 cytotoxic granule-associated RNA binding protein-like 1. (398 aa)
LOC100705812LsmAD domain-containing protein. (1052 aa)
larp4La ribonucleoprotein domain family, member 4Aa. (806 aa)
LOC100690925La ribonucleoprotein domain family, member 1B. (1088 aa)
nufip2Nuclear FMR1 interacting protein 2. (769 aa)
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (603 aa)
LOC100703711Hyaluronan binding protein 4. (408 aa)
LOC100692547Lin-28 homolog A. (202 aa)
mcrip2Si:dkey-44g23.5. (145 aa)
LOC100707688Zgc:193690. (485 aa)
YTHDF1YTH N(6)-methyladenosine RNA binding protein 1. (628 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (770 aa)
I3KSH5_ORENILa ribonucleoprotein domain family, member 4Ab. (329 aa)
LOC100693948DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (483 aa)
Lg19h9orf72Zgc:100846. (478 aa)
nanos3Nanos homolog 3; Belongs to the nanos family. (216 aa)
LOC100703764Cytotoxic granule-associated RNA binding protein 1, like. (391 aa)
LOC100691393Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (647 aa)
g3bp2Zgc:56304. (531 aa)
LOC100698984DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family. (478 aa)
I3KAX8_ORENIAtaxin 2. (1069 aa)
I3KPD0_ORENILSM14A mRNA processing body assembly factor a. (99 aa)
mcrip1MAPK regulated corepressor interacting protein 1. (98 aa)
tia1TIA1 cytotoxic granule-associated RNA binding protein. (406 aa)
ENSONIP00000035932annotation not available (175 aa)
ENSONIP00000038958RNA binding motif protein 4.2. (230 aa)
LOC100697848Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (659 aa)
ENSONIP00000039537annotation not available (288 aa)
LOC100707815Uncharacterized protein; Belongs to the DEAD box helicase family. (534 aa)
YTHDF1-2YTH N6-methyladenosine RNA binding protein 1. (616 aa)
igf2bp3Insulin-like growth factor 2 mRNA binding protein 3. (613 aa)
kpnb1Karyopherin (importin) beta 1. (899 aa)
ENDOVEndonuclease V. (252 aa)
I3JG28_ORENIInsulin-like growth factor 2 mRNA binding protein 1. (568 aa)
ythdf2YTH N(6)-methyladenosine RNA binding protein 2. (638 aa)
Atxn2lAtaxin 2-like. (928 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (641 aa)
I3JFY6_ORENICell cycle associated protein 1a. (686 aa)
ogfod12-oxoglutarate and iron-dependent oxygenase domain containing 1. (559 aa)
RBPMSRNA binding protein, mRNA processing factor. (208 aa)
larp1La ribonucleoprotein domain family, member 1. (1107 aa)
pqbp1Polyglutamine binding protein 1. (235 aa)
fmr1Fragile X mental retardation 1. (600 aa)
Stau2Staufen double-stranded RNA binding protein 2. (680 aa)
LOC100707769La-related protein 4B isoform X2. (477 aa)
ddx6DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family. (483 aa)
I3J3G6_ORENIPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
Lsm14aLSM14A mRNA processing body assembly factor. (106 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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