STRINGSTRING
rab8a rab8a ENSONIP00000035812 ENSONIP00000035812 vps35l vps35l srl srl ENSONIP00000031792 ENSONIP00000031792 ankrd27 ankrd27 LOC100706835 LOC100706835 stam stam LOC100703129 LOC100703129 trarg1 trarg1 rab6a rab6a coro1c coro1c LOC100699238 LOC100699238 LOC100705448 LOC100705448 vps16 vps16 vps26c vps26c LOC100700420 LOC100700420 ENSONIP00000026111 ENSONIP00000026111 RAB9A RAB9A LOC100697336 LOC100697336 rhobtb3 rhobtb3 LOC100696865 LOC100696865 ap5m1 ap5m1 chmp3 chmp3 RAB11FIP3 RAB11FIP3 LOC100689885 LOC100689885 vti1b vti1b I3KTT1_ORENI I3KTT1_ORENI NSG1 NSG1 LOC100698254 LOC100698254 VAMP3 VAMP3 LOC100696864 LOC100696864 I3KSY5_ORENI I3KSY5_ORENI stx16 stx16 LOC100705573 LOC100705573 LOC100693188 LOC100693188 LOC100703352 LOC100703352 Zfyve9 Zfyve9 LOC100707740 LOC100707740 UBE2O UBE2O snf8 snf8 chmp2a chmp2a LOC100694605 LOC100694605 gga3 gga3 I3J168_ORENI I3J168_ORENI chmp4b chmp4b heatr5a heatr5a leprotl1 leprotl1 ANKRD50 ANKRD50 micall2 micall2 LOC100706133 LOC100706133 prepl prepl LOC100697822 LOC100697822 ENSONIP00000000682 ENSONIP00000000682 vps39 vps39 LOC100691544 LOC100691544 LOC100702665 LOC100702665 ankfy1 ankfy1 LOC100699182 LOC100699182 Rbsn Rbsn trappc10 trappc10 LOC100695071 LOC100695071 lamtor1 lamtor1 I3KI81_ORENI I3KI81_ORENI LAPTM4B LAPTM4B vps54 vps54 Atp6ap1 Atp6ap1 ENSONIP00000018267 ENSONIP00000018267 RIC1 RIC1 pikfyve pikfyve LOC100710263 LOC100710263 LOC100707634 LOC100707634 snx3 snx3 rgp1 rgp1 snx33 snx33 LOC100692540 LOC100692540 ap5s1 ap5s1 LOC100700914 LOC100700914 LOC100711848 LOC100711848 eipr1 eipr1 LOC100708757 LOC100708757 I3JZY8_ORENI I3JZY8_ORENI I3JZ47_ORENI I3JZ47_ORENI vps26b vps26b snx6 snx6 chmp7 chmp7 Tbc1d10a Tbc1d10a washc4 washc4 dennd10 dennd10 LOC100696319 LOC100696319 heatr5b heatr5b arl1 arl1 TMEM87B TMEM87B tbc1d10b tbc1d10b LOC100702252 LOC100702252 VPS4B VPS4B Lrrc1 Lrrc1 LOC100703328 LOC100703328 LOC100709386 LOC100709386 LOC100702173 LOC100702173 Tmem50a Tmem50a slc66a2 slc66a2 eps15l1 eps15l1 vps52 vps52 tbc1d23 tbc1d23 bloc1s1 bloc1s1 cln5 cln5 ptpn23 ptpn23 I3JG33_ORENI I3JG33_ORENI LOC100710999 LOC100710999 LOC100708589 LOC100708589 reps1 reps1 LOC102076498 LOC102076498 LOC100701199 LOC100701199 Stx5 Stx5 I3JCP4_ORENI I3JCP4_ORENI vps36 vps36 tbc1d5 tbc1d5 I3JA42_ORENI I3JA42_ORENI GCC2 GCC2 snx30 snx30 LOC100690370 LOC100690370 EHD2 EHD2 LOC100697014 LOC100697014 LOC100695826 LOC100695826 ap5b1 ap5b1 LOC100692392 LOC100692392 reps2 reps2 RAB41 RAB41 LOC100697758 LOC100697758 RNF126 RNF126 LOC100695030 LOC100695030 I3K0A7_ORENI I3K0A7_ORENI Als2 Als2 TMEM87A TMEM87A RAB11B RAB11B LOC100695032 LOC100695032 rab10 rab10 mvb12a mvb12a LOC100710839 LOC100710839 snx12 snx12 LOC100707918 LOC100707918 LOC100711908 LOC100711908 Vps26a Vps26a vta1 vta1 I3IV58_ORENI I3IV58_ORENI LOC100702196 LOC100702196 nsg2 nsg2 LOC100694505 LOC100694505 bet1l bet1l GOLT1B GOLT1B ENSONIP00000071086 ENSONIP00000071086 Gbf1 Gbf1 Snx1 Snx1 vps4a vps4a vps25 vps25 LOC100695572 LOC100695572 LOC100691065 LOC100691065 SNX27 SNX27 plekhj1 plekhj1 LOC100708054 LOC100708054 vps50 vps50 RAB11A RAB11A LOC100711201 LOC100711201 LOC100697355 LOC100697355 rab35 rab35 snx5 snx5 Lyst Lyst cltc cltc LOC100711005 LOC100711005 ENSONIP00000061006 ENSONIP00000061006 LOC100708038 LOC100708038 ENSONIP00000060569 ENSONIP00000060569 vps53 vps53 LOC100697838 LOC100697838 vps51 vps51 LOC100691387 LOC100691387 SRL SRL clcf1 clcf1 I3KCW3_ORENI I3KCW3_ORENI LOC112842449 LOC112842449 I3KT57_ORENI I3KT57_ORENI SNX2 SNX2 hgs hgs LOC100706302 LOC100706302 ap5z1 ap5z1 vps28 vps28 rab13 rab13 LOC100705156 LOC100705156 itsn1 itsn1 ubxn6 ubxn6 snx8 snx8 arfrp1 arfrp1 rab11fip4 rab11fip4 TMEM50B TMEM50B LOC102076290 LOC102076290 LOC100692725 LOC100692725 vcp vcp ap3d1 ap3d1 chmp2b chmp2b I3KU39_ORENI I3KU39_ORENI vps35 vps35 I3JG86_ORENI I3JG86_ORENI LOC100710169 LOC100710169 LOC100697227 LOC100697227 grip1 grip1 SNX18 SNX18 Snx7 Snx7 I3KKD0_ORENI I3KKD0_ORENI leprot leprot chmp1a chmp1a Vti1a Vti1a bloc1s2 bloc1s2 rab15 rab15 chmp1b chmp1b LOC100694873 LOC100694873 LOC100697224 LOC100697224 clec16a clec16a vps29 vps29 gripap1 gripap1 LOC102076226 LOC102076226 I3J130_ORENI I3J130_ORENI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rab8aRAB8A, member RAS oncogene family. (209 aa)
ENSONIP00000035812annotation not available (161 aa)
vps35lVPS35 endosomal protein sorting factor like. (984 aa)
srlSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (490 aa)
ENSONIP00000031792annotation not available (135 aa)
ankrd27Ankyrin repeat domain 27 (VPS9 domain). (1130 aa)
LOC100706835Uncharacterized protein. (344 aa)
stamSignal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (522 aa)
LOC100703129Sorting nexin. (579 aa)
trarg1Trafficking regulator of GLUT4 (SLC2A4) 1a. (180 aa)
rab6aRAB6A, member RAS oncogene family. (211 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (510 aa)
LOC100699238DENN domain containing 1B. (875 aa)
LOC100705448Coronin; Belongs to the WD repeat coronin family. (1247 aa)
vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (869 aa)
vps26cVPS26 endosomal protein sorting factor C. (307 aa)
LOC100700420Uncharacterized protein. (203 aa)
ENSONIP00000026111ADP-ribosylation factor 6b. (111 aa)
RAB9ARAB9A, member RAS oncogene family. (202 aa)
LOC100697336RAB9B, member RAS oncogene family. (202 aa)
rhobtb3Si:dkey-6b12.5. (619 aa)
LOC100696865Uncharacterized protein. (311 aa)
ap5m1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (491 aa)
chmp3Charged multivesicular body protein 3. (220 aa)
RAB11FIP3RAB11 family interacting protein 3. (1101 aa)
LOC100689885CAP-Gly domain-containing protein. (1274 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (226 aa)
I3KTT1_ORENISi:ch211-233a24.2. (4965 aa)
NSG1Neuronal vesicle trafficking associated 1. (185 aa)
LOC100698254Si:ch211-11k18.4. (451 aa)
VAMP3Vesicle associated membrane protein 3. (121 aa)
LOC100696864Sortilin. (842 aa)
I3KSY5_ORENISi:ch73-389b16.2. (1204 aa)
stx16Syntaxin 16; Belongs to the syntaxin family. (317 aa)
LOC100705573PX domain-containing protein. (378 aa)
LOC100693188MICAL-like 1a. (921 aa)
LOC100703352RAB8A, member RAS oncogene family. (206 aa)
Zfyve9Zinc finger, FYVE domain containing 9a. (1201 aa)
LOC100707740CAP-ZIP_m domain-containing protein. (1480 aa)
UBE2OUbiquitin conjugating enzyme E2 O. (1389 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (257 aa)
chmp2aCharged multivesicular body protein 2A. (220 aa)
LOC100694605Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (752 aa)
gga3Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (727 aa)
I3J168_ORENIZinc finger, FYVE domain containing 9b. (868 aa)
chmp4bCharged multivesicular body protein 4Bb. (222 aa)
heatr5aHEAT repeat containing 5a. (2066 aa)
leprotl1Leptin receptor overlapping transcript like 1. (131 aa)
ANKRD50Ankyrin repeat domain 50. (1426 aa)
micall2Mical-like 2a. (768 aa)
LOC100706133Zgc:162698. (583 aa)
preplProlyl endopeptidase like. (727 aa)
LOC100697822Uncharacterized protein. (215 aa)
ENSONIP00000000682Intersectin 2a. (1301 aa)
vps39VPS39 subunit of HOPS complex. (878 aa)
LOC100691544Glutamate receptor interacting protein 2b. (1185 aa)
LOC100702665Uncharacterized protein. (200 aa)
ankfy1Ankyrin repeat and FYVE domain containing 1. (1176 aa)
LOC100699182Glutamate receptor interacting protein 2a. (1084 aa)
RbsnRabenosyn, RAB effector. (785 aa)
trappc10Trafficking protein particle complex 10. (1264 aa)
LOC100695071Ankyrin repeat domain 50-like. (1406 aa)
lamtor1Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (160 aa)
I3KI81_ORENIATPase H+ transporting accessory protein 1b. (430 aa)
LAPTM4BLysosomal protein transmembrane 4 beta. (235 aa)
vps54VPS54 subunit of GARP complex. (987 aa)
Atp6ap1ATPase H+ transporting accessory protein 1a. (468 aa)
ENSONIP00000018267Si:ch211-193c2.2. (223 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1444 aa)
pikfyvePhosphoinositide kinase, FYVE finger containing. (2087 aa)
LOC100710263Si:dkey-98f17.5. (448 aa)
LOC100707634Sorting nexin. (636 aa)
snx3Sorting nexin 3. (162 aa)
rgp1GP1 homolog, RAB6A GEF complex partner 1. (386 aa)
snx33Sorting nexin. (557 aa)
LOC100692540Sorting nexin 1a. (749 aa)
ap5s1Adaptor related protein complex 5 subunit sigma 1. (200 aa)
LOC100700914RAB15, member RAS oncogene family. (211 aa)
LOC100711848PX domain-containing protein. (433 aa)
eipr1EARP complex and GARP complex interacting protein 1. (409 aa)
LOC100708757PH domain-containing protein. (255 aa)
I3JZY8_ORENISortilin. (763 aa)
I3JZ47_ORENIZinc finger, FYVE domain containing 16. (1400 aa)
vps26bVPS26, retromer complex component B. (338 aa)
snx6Sorting nexin; Involved in several stages of intracellular trafficking. (407 aa)
chmp7Charged multivesicular body protein 7. (450 aa)
Tbc1d10aTBC1 domain family, member 10Aa. (504 aa)
washc4WASH complex subunit 4. (913 aa)
dennd10DENN domain containing 10. (359 aa)
LOC100696319Ring finger protein 126. (311 aa)
heatr5bHEAT repeat containing 5B. (2065 aa)
arl1ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. (164 aa)
TMEM87BTransmembrane protein 87B. (573 aa)
tbc1d10bTBC1 domain family, member 10b. (917 aa)
LOC100702252Zgc:153733. (261 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (529 aa)
Lrrc1Leucine rich repeat containing 1. (590 aa)
LOC100703328Si:dkey-16l2.16. (208 aa)
LOC100709386Charged multivesicular body protein 5a. (220 aa)
LOC100702173Golgi transport 1Bb. (138 aa)
Tmem50aTransmembrane protein 50A. (164 aa)
slc66a2Solute carrier family 66 member 2. (271 aa)
eps15l1Epidermal growth factor receptor pathway substrate 15-like 1a. (932 aa)
vps52VPS52 subunit of GARP complex. (703 aa)
tbc1d23TBC1 domain family, member 23. (696 aa)
bloc1s1Biogenesis of lysosomal organelles complex-1, subunit 1. (147 aa)
cln5CLN5 intracellular trafficking protein. (330 aa)
ptpn23Protein tyrosine phosphatase, non-receptor type 23, a. (1927 aa)
I3JG33_ORENIRAB11 family interacting protein 4 (class II) a. (607 aa)
LOC100710999Charged multivesicular body protein 5b. (219 aa)
LOC100708589Charged multivesicular body protein 4C. (218 aa)
reps1RALBP1 associated Eps domain containing 1. (817 aa)
LOC102076498Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (544 aa)
LOC100701199Charged multivesicular body protein 6a. (207 aa)
Stx5Syntaxin 5A; Belongs to the syntaxin family. (305 aa)
I3JCP4_ORENISi:ch211-114c17.1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
vps36Vacuolar protein sorting 36 homolog. (382 aa)
tbc1d5TBC1 domain family, member 5. (874 aa)
I3JA42_ORENISyntaxin 6; Belongs to the syntaxin family. (236 aa)
GCC2GRIP and coiled-coil domain containing 2. (1665 aa)
snx30Sorting nexin family member 30. (449 aa)
LOC100690370Sorting nexin. (541 aa)
EHD2EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (540 aa)
LOC100697014Uncharacterized protein. (430 aa)
LOC100695826Rab-GAP TBC domain-containing protein. (470 aa)
ap5b1Adaptor related protein complex 5 subunit beta 1. (942 aa)
LOC100692392Uncharacterized protein. (226 aa)
reps2RALBP1 associated Eps domain containing 2. (668 aa)
RAB41RAB41, member RAS oncogene family. (219 aa)
LOC100697758Uncharacterized protein. (218 aa)
RNF126Ring finger protein 126. (330 aa)
LOC100695030Sorting nexin 4. (482 aa)
I3K0A7_ORENIDENN/MADD domain containing 1A. (958 aa)
Als2Amyotrophic lateral sclerosis 2 protein. (1693 aa)
TMEM87ATransmembrane protein 87A. (552 aa)
RAB11BRas-related protein Rab-11B. (235 aa)
LOC100695032RAB29, member RAS oncogene family. (207 aa)
rab10RAB10, member RAS oncogene family. (201 aa)
mvb12aUncharacterized protein. (296 aa)
LOC100710839Lysosomal protein transmembrane 4 beta. (225 aa)
snx12Sorting nexin 12. (160 aa)
LOC100707918Sorting nexin 27a. (563 aa)
LOC100711908Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1705 aa)
Vps26aVPS26, retromer complex component A. (388 aa)
vta1Vesicle (multivesicular body) trafficking 1. (326 aa)
I3IV58_ORENISyntaxin 10. (246 aa)
LOC100702196Zgc:136908; Belongs to the AAA ATPase family. (826 aa)
nsg2Neuronal vesicle trafficking associated 2. (193 aa)
LOC100694505Uncharacterized protein. (1643 aa)
bet1lBet1 golgi vesicular membrane trafficking protein like. (109 aa)
GOLT1BGolgi transport 1Ba. (163 aa)
ENSONIP00000071086Charged multivesicular body protein 4b isoform X2. (230 aa)
Gbf1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1864 aa)
Snx1Sorting nexin 1b. (498 aa)
vps4aVacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (485 aa)
vps25Vacuolar protein-sorting-associated protein 25. (174 aa)
LOC100695572Uncharacterized protein. (220 aa)
LOC100691065Ras-related protein Rab-8B. (207 aa)
SNX27Sorting nexin 27. (586 aa)
plekhj1Pleckstrin homology domain-containing family J member 1 isoform X1. (189 aa)
LOC100708054Epidermal growth factor receptor substrate 15 isoform X2. (1103 aa)
vps50VPS50 EARP/GARPII complex subunit. (1030 aa)
RAB11ARAB11A, member RAS oncogene family. (215 aa)
LOC100711201Si:dkey-246g23.2. (244 aa)
LOC100697355EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (576 aa)
rab35RAB35, member RAS oncogene family b. (201 aa)
snx5Sorting nexin; Involved in several stages of intracellular trafficking. (409 aa)
LystLysosomal trafficking regulator. (3729 aa)
cltcClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1686 aa)
LOC100711005Uncharacterized protein; Belongs to the AAA ATPase family. (446 aa)
ENSONIP00000061006Calponin homology domain-containing protein DDB_G0272472. (331 aa)
LOC100708038Ras-related protein Rab-6B. (231 aa)
ENSONIP00000060569annotation not available (293 aa)
vps53VPS53 subunit of GARP complex. (836 aa)
LOC100697838Rab-interacting lysosomal protein. (425 aa)
vps51VPS51 subunit of GARP complex. (841 aa)
LOC100691387Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1642 aa)
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (817 aa)
clcf1Cardiotrophin-like cytokine factor 1. (519 aa)
I3KCW3_ORENIWAS protein family homolog 1. (474 aa)
LOC112842449Ankyrin repeat domain-containing protein 50-like. (493 aa)
I3KT57_ORENIRAB6B, member RAS oncogene family a. (231 aa)
SNX2Sorting nexin 2. (513 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (786 aa)
LOC100706302RAB11a, member RAS oncogene family, like. (216 aa)
ap5z1Adaptor related protein complex 5 subunit zeta 1. (814 aa)
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (303 aa)
rab13RAB13, member RAS oncogene family. (200 aa)
LOC100705156Charged multivesicular body protein 6. (205 aa)
itsn1Intersectin 1 (SH3 domain protein). (1795 aa)
ubxn6UBX domain protein 6. (473 aa)
snx8Sorting nexin 8a. (564 aa)
arfrp1ADP-ribosylation factor related protein 1. (217 aa)
rab11fip4RAB11 family interacting protein 4 (class II) b. (570 aa)
TMEM50BTransmembrane protein 50B. (149 aa)
LOC102076290Ras-related protein Rab-7A. (210 aa)
LOC100692725DENN domain-containing protein 1B isoform X1. (943 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (816 aa)
ap3d1Adaptor related protein complex 3 subunit delta 1. (1167 aa)
chmp2bCharged multivesicular body protein 2Bb. (214 aa)
I3KU39_ORENIDynactin 1b. (1239 aa)
vps35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (871 aa)
I3JG86_ORENIScribble planar cell polarity protein. (1749 aa)
LOC100710169RAB14, member RAS oncogene family. (215 aa)
LOC100697227EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (561 aa)
grip1Glutamate receptor interacting protein 1. (1126 aa)
SNX18Sorting nexin. (590 aa)
Snx7Sorting nexin 7. (448 aa)
I3KKD0_ORENIIntersectin 2b. (1607 aa)
leprotLeptin receptor overlapping transcript. (258 aa)
chmp1aCharged multivesicular body protein 1A. (203 aa)
Vti1aVesicle transport through interaction with t-SNAREs 1A. (237 aa)
bloc1s2Biogenesis of lysosomal organelles complex-1, subunit 2. (218 aa)
rab15RAB15, member RAS oncogene family. (257 aa)
chmp1bChromatin modifying protein 1B. (208 aa)
LOC100694873Epidermal growth factor receptor pathway substrate 15 like 1. (892 aa)
LOC100697224RAB11B, member RAS oncogene family, a. (218 aa)
clec16aC-type lectin domain containing 16A. (1135 aa)
vps29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (187 aa)
gripap1GRIP1 associated protein 1. (925 aa)
LOC102076226MICAL-like protein 2 isoform X1. (766 aa)
I3J130_ORENIMARVEL domain-containing protein. (223 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (24%) [HD]