(19 nodes) Semaphorin receptor activity network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100711384	Plexin b1b. (2244 aa)
	LOC100703115	Plexin B3. (1874 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (999 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1423 aa)
	LOC100695575	Plexin A1a. (1896 aa)
	LOC100693707	Plexin b1a. (2208 aa)
	ENSONIP00000070314	Plexin A3 isoform X1. (443 aa)
	plxna4	Plexin A4. (1910 aa)
	I3KNB3_ORENI	Sema domain-containing protein. (1865 aa)
	plxna1	Plexin A1. (1896 aa)
	I3JQ94_ORENI	Plexin b2b. (1853 aa)
	LOC100710907	Plexin A2. (1901 aa)
	LOC100690065	Plexin C1. (1515 aa)
	PLXNA2	Plexin A2. (1913 aa)
	mst1r	Macrophage stimulating 1 receptor b. (1374 aa)
	PLXND1	Plexin D1. (1899 aa)
	I3KBB2_ORENI	Plexin A3. (1437 aa)
	I3JQC3_ORENI	Sema domain-containing protein. (1294 aa)
	LOC100701740	Macrophage stimulating 1 receptor a. (1371 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000070314	I3KBB2_ORENI	ENSONIP00000070314	ENSONIP00000018407	Plexin A3 isoform X1.	Plexin A3.	0.927
ENSONIP00000070314	nrp1	ENSONIP00000070314	ENSONIP00000004630	Plexin A3 isoform X1.	Neuropilin; Belongs to the neuropilin family.	0.668
I3JQ94_ORENI	LOC100701740	ENSONIP00000056006	ENSONIP00000005149	Plexin b2b.	Macrophage stimulating 1 receptor a.	0.514
I3JQ94_ORENI	met	ENSONIP00000056006	ENSONIP00000080477	Plexin b2b.	MET proto-oncogene, receptor tyrosine kinase.	0.514
I3JQ94_ORENI	mst1r	ENSONIP00000056006	ENSONIP00000025557	Plexin b2b.	Macrophage stimulating 1 receptor b.	0.514
I3JQ94_ORENI	nrp1	ENSONIP00000056006	ENSONIP00000004630	Plexin b2b.	Neuropilin; Belongs to the neuropilin family.	0.656
I3JQC3_ORENI	LOC100701740	ENSONIP00000011066	ENSONIP00000005149	Sema domain-containing protein.	Macrophage stimulating 1 receptor a.	0.514
I3JQC3_ORENI	met	ENSONIP00000011066	ENSONIP00000080477	Sema domain-containing protein.	MET proto-oncogene, receptor tyrosine kinase.	0.514
I3JQC3_ORENI	mst1r	ENSONIP00000011066	ENSONIP00000025557	Sema domain-containing protein.	Macrophage stimulating 1 receptor b.	0.514
I3JQC3_ORENI	nrp1	ENSONIP00000011066	ENSONIP00000004630	Sema domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.656
I3KBB2_ORENI	ENSONIP00000070314	ENSONIP00000018407	ENSONIP00000070314	Plexin A3.	Plexin A3 isoform X1.	0.927
I3KBB2_ORENI	nrp1	ENSONIP00000018407	ENSONIP00000004630	Plexin A3.	Neuropilin; Belongs to the neuropilin family.	0.789
I3KNB3_ORENI	LOC100701740	ENSONIP00000065145	ENSONIP00000005149	Sema domain-containing protein.	Macrophage stimulating 1 receptor a.	0.514
I3KNB3_ORENI	met	ENSONIP00000065145	ENSONIP00000080477	Sema domain-containing protein.	MET proto-oncogene, receptor tyrosine kinase.	0.514
I3KNB3_ORENI	mst1r	ENSONIP00000065145	ENSONIP00000025557	Sema domain-containing protein.	Macrophage stimulating 1 receptor b.	0.514
I3KNB3_ORENI	nrp1	ENSONIP00000065145	ENSONIP00000004630	Sema domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.656
LOC100690065	nrp1	ENSONIP00000027540	ENSONIP00000004630	Plexin C1.	Neuropilin; Belongs to the neuropilin family.	0.668
LOC100693707	LOC100701740	ENSONIP00000073728	ENSONIP00000005149	Plexin b1a.	Macrophage stimulating 1 receptor a.	0.514
LOC100693707	met	ENSONIP00000073728	ENSONIP00000080477	Plexin b1a.	MET proto-oncogene, receptor tyrosine kinase.	0.521
LOC100693707	mst1r	ENSONIP00000073728	ENSONIP00000025557	Plexin b1a.	Macrophage stimulating 1 receptor b.	0.514