37 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl7l1	Ribosomal protein L7-like 1. (273 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (220 aa)
	rpl18	60S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
	rpl28	Ribosomal protein L28. (142 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPL38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (72 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	rpl6	Ribosomal protein L6. (325 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	LOC100708525	Ribosomal protein L26. (145 aa)
	ENSONIP00000029827	annotation not available (173 aa)
	RPL5	Ribosomal protein L5. (299 aa)
	RPL5-2	Large subunit ribosomal protein L5e. (316 aa)
	Rpl37a	Large subunit ribosomal protein L37Ae. (68 aa)
	rpl10	Ribosomal protein L10. (285 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl14	Ribosomal protein L14. (137 aa)
	rpl7	Ribosomal protein L7. (245 aa)
	rpl4	Ribosomal protein L4. (383 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (261 aa)
	aknad1	AT-hook-containing transcription factor. (1292 aa)
	Rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (225 aa)
	Mrpl1	Mitochondrial ribosomal protein L1. (392 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (246 aa)
	RPL7A	Ribosomal protein L7a. (281 aa)
	ENSONIP00000059020	annotation not available (118 aa)
	LOC100691806	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rpl35	Ribosomal protein L35. (138 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (181 aa)
	I3KBJ9_ORENI	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (139 aa)
	LOC100711099	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (470 aa)
	ENSONIP00000079022	60S ribosomal protein L27a-like isoform X3. (30 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000029827	ENSONIP00000059020	ENSONIP00000029827	ENSONIP00000059020	annotation not available	annotation not available	0.977
ENSONIP00000029827	ENSONIP00000079022	ENSONIP00000029827	ENSONIP00000079022	annotation not available	60S ribosomal protein L27a-like isoform X3.	0.977
ENSONIP00000029827	I3KBJ9_ORENI	ENSONIP00000029827	ENSONIP00000072715	annotation not available	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.970
ENSONIP00000029827	LOC100691806	ENSONIP00000029827	ENSONIP00000060929	annotation not available	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.970
ENSONIP00000029827	LOC100708525	ENSONIP00000029827	ENSONIP00000022288	annotation not available	Ribosomal protein L26.	0.988
ENSONIP00000029827	LOC100711099	ENSONIP00000029827	ENSONIP00000076368	annotation not available	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.983
ENSONIP00000029827	Mrpl1	ENSONIP00000029827	ENSONIP00000051180	annotation not available	Mitochondrial ribosomal protein L1.	0.864
ENSONIP00000029827	RPL19	ENSONIP00000029827	ENSONIP00000001138	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.962
ENSONIP00000029827	RPL19-2	ENSONIP00000029827	ENSONIP00000020477	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.962
ENSONIP00000029827	RPL27A	ENSONIP00000029827	ENSONIP00000071813	annotation not available	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.992
ENSONIP00000029827	RPL38	ENSONIP00000029827	ENSONIP00000010059	annotation not available	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.992
ENSONIP00000029827	RPL3L	ENSONIP00000029827	ENSONIP00000036296	annotation not available	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.	0.983
ENSONIP00000029827	RPL5	ENSONIP00000029827	ENSONIP00000030470	annotation not available	Ribosomal protein L5.	0.978
ENSONIP00000029827	RPL5-2	ENSONIP00000029827	ENSONIP00000031331	annotation not available	Large subunit ribosomal protein L5e.	0.978
ENSONIP00000029827	RPL7A	ENSONIP00000029827	ENSONIP00000057546	annotation not available	Ribosomal protein L7a.	0.993
ENSONIP00000029827	Rpl12	ENSONIP00000029827	ENSONIP00000050984	annotation not available	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.979
ENSONIP00000029827	Rpl37a	ENSONIP00000029827	ENSONIP00000032425	annotation not available	Large subunit ribosomal protein L37Ae.	0.987
ENSONIP00000029827	aknad1	ENSONIP00000029827	ENSONIP00000049940	annotation not available	AT-hook-containing transcription factor.	0.918
ENSONIP00000029827	rpl14	ENSONIP00000029827	ENSONIP00000043006	annotation not available	Ribosomal protein L14.	0.977
ENSONIP00000029827	rpl17	ENSONIP00000029827	ENSONIP00000047928	annotation not available	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.993