STRINGSTRING
rps23 rps23 RPS29 RPS29 rps6 rps6 ENSONIP00000079022 ENSONIP00000079022 LOC100711099 LOC100711099 ENSONIP00000076314 ENSONIP00000076314 I3KBJ9_ORENI I3KBJ9_ORENI RPL38 RPL38 RPL19 RPL19 rps2 rps2 rpl30 rpl30 rplp1 rplp1 rpl23a rpl23a LOC100701341 LOC100701341 LOC100701613 LOC100701613 LOC100691161 LOC100691161 LOC100691432 LOC100691432 rpl18 rpl18 rpl28 rpl28 rpl37 rpl37 dhx29 dhx29 rpl7l1 rpl7l1 fau fau ENSONIP00000072598 ENSONIP00000072598 RPL27A RPL27A rpl35 rpl35 LOC100691806 LOC100691806 ENSONIP00000059020 ENSONIP00000059020 LOC100705775 LOC100705775 RPL7A RPL7A zcchc17 zcchc17 I3KL14_ORENI I3KL14_ORENI Mrpl1 Mrpl1 Rpl12 Rpl12 aknad1 aknad1 rps9 rps9 rpl17 rpl17 rpl4 rpl4 rps5 rps5 rpl7 rpl7 rpl14 rpl14 ENSONIP00000041950 ENSONIP00000041950 LOC100691333 LOC100691333 rps21 rps21 mrps11 mrps11 rpl29 rpl29 eif2a eif2a RPL3L RPL3L rpl10 rpl10 Rpl37a Rpl37a ENSONIP00000032299 ENSONIP00000032299 ENSONIP00000031770 ENSONIP00000031770 LOC100707344 LOC100707344 RPL5-2 RPL5-2 RPL5 RPL5 ENSONIP00000029827 ENSONIP00000029827 rps26 rps26 LOC100698589 LOC100698589 LOC100708525 LOC100708525 RPL19-2 RPL19-2 rpl6 rpl6 rpl21 rpl21 uba52 uba52 rps3a rps3a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (161 aa)
RPS29Ribosomal protein S29. (60 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
ENSONIP0000007902260S ribosomal protein L27a-like isoform X3. (30 aa)
LOC100711099Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (470 aa)
ENSONIP00000076314Small subunit ribosomal protein S27e. (84 aa)
I3KBJ9_ORENIRibosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (139 aa)
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (72 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
rpl30Ribosomal protein L30. (116 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (220 aa)
LOC100701341Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
LOC100701613Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (184 aa)
LOC100691161Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
LOC100691432Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
rpl28Ribosomal protein L28. (142 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1376 aa)
rpl7l1Ribosomal protein L7-like 1. (273 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
ENSONIP00000072598annotation not available (145 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (181 aa)
rpl35Ribosomal protein L35. (138 aa)
LOC100691806Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
ENSONIP00000059020annotation not available (118 aa)
LOC10070577540S ribosomal protein S27 isoform X2. (92 aa)
RPL7ARibosomal protein L7a. (281 aa)
zcchc17Zinc finger, CCHC domain containing 17. (246 aa)
I3KL14_ORENIEukaryotic translation initiation factor 2D. (591 aa)
Mrpl1Mitochondrial ribosomal protein L1. (392 aa)
Rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (225 aa)
aknad1AT-hook-containing transcription factor. (1292 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (261 aa)
rpl4Ribosomal protein L4. (383 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (224 aa)
rpl7Ribosomal protein L7. (245 aa)
rpl14Ribosomal protein L14. (137 aa)
ENSONIP00000041950Ribosomal protein S28. (63 aa)
LOC10069133340S ribosomal protein S27. (93 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (94 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (212 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
eif2aEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (629 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
rpl10Ribosomal protein L10. (285 aa)
Rpl37aLarge subunit ribosomal protein L37Ae. (68 aa)
ENSONIP00000032299annotation not available (85 aa)
ENSONIP00000031770annotation not available (203 aa)
LOC10070734440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (312 aa)
RPL5-2Large subunit ribosomal protein L5e. (316 aa)
RPL5Ribosomal protein L5. (299 aa)
ENSONIP00000029827annotation not available (173 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
LOC100698589Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
LOC100708525Ribosomal protein L26. (145 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
rpl6Ribosomal protein L6. (325 aa)
rpl21Ribosomal protein L21. (160 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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