STRINGSTRING
ENSONIP00000080507 ENSONIP00000080507 LOC112841626 LOC112841626 jagn1 jagn1 I3JMW5_ORENI I3JMW5_ORENI LOC100711898 LOC100711898 LOC100711357 LOC100711357 LOC100696076 LOC100696076 Fasn Fasn dhrs7b dhrs7b lef1 lef1 LOC100698057 LOC100698057 ncoa2 ncoa2 srp54 srp54 USB1 USB1 SP3 SP3 I3J5W0_ORENI I3J5W0_ORENI cebpa cebpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSONIP00000080507Interleukin-17F isoform X1. (162 aa)
LOC112841626Erythroid transcription factor-like isoform X1. (280 aa)
jagn1Protein jagunal homolog 1. (183 aa)
I3JMW5_ORENIBZIP domain-containing protein. (179 aa)
LOC100711898Uncharacterized protein LOC100711898. (2079 aa)
LOC100711357Uncharacterized protein LOC100711629. (2101 aa)
LOC100696076GATA binding protein 1a. (457 aa)
FasnCoiled-coil domain containing 57. (2541 aa)
dhrs7bDehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (311 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
LOC100698057Nuclear receptor coactivator. (1528 aa)
ncoa2Nuclear receptor coactivator 2. (1538 aa)
srp54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (515 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (252 aa)
SP3Sp3a transcription factor. (671 aa)
I3J5W0_ORENIUncharacterized protein. (187 aa)
cebpaCCAAT/enhancer-binding protein. (295 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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