STRINGSTRING
ccn1 ccn1 CTHRC1 CTHRC1 tnn tnn LOC100691607 LOC100691607 I3JV01_ORENI I3JV01_ORENI atraid atraid LOC102081604 LOC102081604 GREM1 GREM1 nf2 nf2 LOC100696076 LOC100696076 LOC100697642 LOC100697642 npr3 npr3 LOC112841626 LOC112841626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccn1Cellular communication network factor 1. (379 aa)
CTHRC1Collagen triple helix repeat containing 1b. (126 aa)
tnnTenascin-N. (1211 aa)
LOC100691607Uncharacterized protein. (693 aa)
I3JV01_ORENIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)
atraidAll-trans retinoic acid-induced differentiation factor. (231 aa)
LOC102081604Transmembrane protein 119b. (280 aa)
GREM1Gremlin. (182 aa)
nf2Neurofibromin 2a (merlin). (632 aa)
LOC100696076GATA binding protein 1a. (457 aa)
LOC100697642Neurofibromin 2b (merlin). (603 aa)
npr3Natriuretic peptide receptor 3. (516 aa)
LOC112841626Erythroid transcription factor-like isoform X1. (280 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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