STRINGSTRING
LOC100703662 LOC100703662 taf6 taf6 wdr4 wdr4 LOC100695351 LOC100695351 LOC100691830 LOC100691830 LOC100699818 LOC100699818 snrpe snrpe I3K0Z9_ORENI I3K0Z9_ORENI LOC100711479 LOC100711479 I3KWS1_ORENI I3KWS1_ORENI snrpd1 snrpd1 I3KZK8_ORENI I3KZK8_ORENI Snrpf Snrpf clns1a clns1a LOC100703842 LOC100703842 I3K1L6_ORENI I3K1L6_ORENI mettl14 mettl14 trmt61a trmt61a LOC102081481 LOC102081481 ncoa6 ncoa6 rnf2 rnf2 ENSONIP00000056910 ENSONIP00000056910 snrpb snrpb snrpd2 snrpd2 kdm6a kdm6a MAX MAX RING1 RING1 ENSONIP00000053028 ENSONIP00000053028 ruvbl2 ruvbl2 LOC100698146 LOC100698146 setd1a setd1a Trmt61b Trmt61b LOC100708975 LOC100708975 LOC100699848 LOC100699848 mcrs1 mcrs1 AEBP2 AEBP2 ENSONIP00000038409 ENSONIP00000038409 LOC100706337 LOC100706337 I3IWQ1_ORENI I3IWQ1_ORENI RAMAC RAMAC I3KVD8_ORENI I3KVD8_ORENI men1 men1 LOC100701898 LOC100701898 hsd17b10 hsd17b10 I3KBQ6_ORENI I3KBQ6_ORENI riok1 riok1 phf20 phf20 I3KWS6_ORENI I3KWS6_ORENI Kdm6b Kdm6b LOC100689867 LOC100689867 mettl1 mettl1 ruvbl1 ruvbl1 wdr77 wdr77 I3KRX1_ORENI I3KRX1_ORENI LOC100709494 LOC100709494 I3KQY8_ORENI I3KQY8_ORENI suz12 suz12 ezh2 ezh2 prdm4 prdm4 chd8 chd8 prmt5 prmt5 LOC100692647 LOC100692647 wtap wtap wdr5 wdr5 kmt2d kmt2d I3K2A8_ORENI I3K2A8_ORENI hcfc2 hcfc2 ash2l ash2l pagr1 pagr1 I3JWN2_ORENI I3JWN2_ORENI I3JTS7_ORENI I3JTS7_ORENI paxip1 paxip1 mettl3 mettl3 LOC100702714 LOC100702714 eed eed trmt6 trmt6 EZH1 EZH1 n6amt1 n6amt1 rbm15 rbm15 kmt2b kmt2b trmt10c trmt10c snrpd3 snrpd3 LOC100698445 LOC100698445 twf2 twf2 lg10h17orf49 lg10h17orf49 ino80c ino80c tex10 tex10 virma virma KMT2A KMT2A prpf31 prpf31 rbbp5 rbbp5 LOC100705541 LOC100705541
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100703662Host cell factor C1b. (1753 aa)
taf6Transcription initiation factor TFIID subunit 6. (695 aa)
wdr4tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (441 aa)
LOC100695351Retinoblastoma binding protein 4, like. (479 aa)
LOC100691830Uncharacterized protein. (133 aa)
LOC100699818PHD finger protein 1. (561 aa)
snrpeSmall nuclear ribonucleoprotein E. (92 aa)
I3K0Z9_ORENIDUF4801 domain-containing protein. (354 aa)
LOC100711479Retinoblastoma binding protein 4. (449 aa)
I3KWS1_ORENICXXC finger protein 1b. (560 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (110 aa)
I3KZK8_ORENIRNA binding motif protein 15B. (391 aa)
SnrpfSmall nuclear ribonucleoprotein F. (85 aa)
clns1aChloride channel, nucleotide-sensitive, 1A. (244 aa)
LOC100703842Zinc finger protein AEBP2. (454 aa)
I3K1L6_ORENICbl proto-oncogene-like 1, E3 ubiquitin protein ligase. (412 aa)
mettl14Methyltransferase like 14; Belongs to the MT-A70-like family. (460 aa)
trmt61atRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (296 aa)
LOC102081481Proline, glutamate and leucine rich protein 1. (1300 aa)
ncoa6Nuclear receptor coactivator 6. (2385 aa)
rnf2Ring finger protein 2. (397 aa)
ENSONIP00000056910LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2C. (3073 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (256 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
kdm6aLysine (K)-specific demethylase 6A. (1450 aa)
MAXMYC associated factor X. (254 aa)
RING1RING-type domain-containing protein. (394 aa)
ENSONIP00000053028MAX gene-associated protein isoform X1. (331 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (467 aa)
LOC100698146Zinc finger protein 335. (1586 aa)
setd1a[histone H3]-lysine4 N-trimethyltransferase SETD1. (2262 aa)
Trmt61bTRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit. (385 aa)
LOC100708975Myc associated factor X. (165 aa)
LOC100699848Lysine (K)-specific demethylase 6B, b. (1822 aa)
mcrs1Microspherule protein 1. (467 aa)
AEBP2AE binding protein 2. (468 aa)
ENSONIP00000038409annotation not available (370 aa)
LOC100706337WD_REPEATS_REGION domain-containing protein. (441 aa)
I3IWQ1_ORENIPHD finger protein 19. (590 aa)
RAMACRNMT-activating mRNA cap methyltransferase subunit isoform X1. (163 aa)
I3KVD8_ORENILysine (K)-specific demethylase 6B, a. (526 aa)
men1Multiple endocrine neoplasia I. (629 aa)
LOC100701898VEFS-Box domain-containing protein. (733 aa)
hsd17b10Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
I3KBQ6_ORENIC2H2-type domain-containing protein. (98 aa)
riok1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (606 aa)
phf20PHD finger protein 20, a. (1005 aa)
I3KWS6_ORENIHost cell factor C1a. (1752 aa)
Kdm6bLysine-specific demethylase 6B. (1040 aa)
LOC100689867Histone-lysine N-methyltransferase 2B. (3138 aa)
mettl1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (244 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
wdr77WD_REPEATS_REGION domain-containing protein. (334 aa)
I3KRX1_ORENIUncharacterized protein. (593 aa)
LOC100709494Twinfilin actin-binding protein 2b. (599 aa)
I3KQY8_ORENISi:ch211-195d17.2. (401 aa)
suz12SUZ12 polycomb repressive complex 2 subunit b. (691 aa)
ezh2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (763 aa)
prdm4PR domain containing 4. (879 aa)
chd8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2621 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (635 aa)
LOC100692647SET domain containing 1B, histone lysine methyltransferase a. (1811 aa)
wtapWT1 associated protein. (421 aa)
wdr5WD repeat domain 5. (333 aa)
kmt2dLysine (K)-specific methyltransferase 2D. (5041 aa)
I3K2A8_ORENILysine (K)-specific demethylase 6A, like. (1461 aa)
hcfc2Host cell factor C2. (764 aa)
ash2lAsh2 like, histone lysine methyltransferase complex subunit. (592 aa)
pagr1PAXIP1 associated glutamate-rich protein 1. (277 aa)
I3JWN2_ORENIMetal response element binding transcription factor 2. (412 aa)
I3JTS7_ORENILysine (K)-specific methyltransferase 2Cb. (417 aa)
paxip1PAX interacting (with transcription-activation domain) protein 1. (1095 aa)
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (594 aa)
LOC100702714Uncharacterized protein. (236 aa)
eedEmbryonic ectoderm development. (443 aa)
trmt6tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (474 aa)
EZH1Enhancer of zeste 1 polycomb repressive complex 2 subunit. (768 aa)
n6amt1N-6 adenine-specific DNA methyltransferase 1. (218 aa)
rbm15RNA binding motif protein 15. (855 aa)
kmt2bLysine (K)-specific methyltransferase 2Bb. (3861 aa)
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (505 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
LOC100698445Uncharacterized protein. (177 aa)
twf2WD repeat domain 82. (581 aa)
lg10h17orf49Zgc:103508. (276 aa)
ino80cINO80 complex subunit C. (203 aa)
tex10Testis expressed 10. (943 aa)
virmaVir like m6A methyltransferase associated. (1895 aa)
KMT2AHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (4124 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (482 aa)
rbbp5Retinoblastoma binding protein 5. (570 aa)
LOC100705541CXXC finger protein 1a. (622 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.