20 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bad	BCL2 associated agonist of cell death b. (158 aa)
	LOC100690921	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (527 aa)
	LOC100703193	ly6/PLAUR domain-containing protein 1. (192 aa)
	LOC100699483	Uncharacterized protein. (539 aa)
	LOC100696880	Uncharacterized protein. (540 aa)
	I3KAU3_ORENI	Insulin-like growth factor 2b. (217 aa)
	LOC100696293	Si:ch211-39a7.1. (576 aa)
	LOC100699752	Cholinergic receptor, nicotinic, beta polypeptide 3a. (554 aa)
	LOC100703627	Cholinergic receptor, nicotinic, alpha 4b. (604 aa)
	I3JWT4_ORENI	Uncharacterized protein. (525 aa)
	LOC100709152	Uncharacterized protein; Belongs to the potassium channel family. (696 aa)
	LOC100697082	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (693 aa)
	LOC100691116	Cholinergic receptor, nicotinic, alpha 7 (neuronal). (512 aa)
	LOC100708615	Cholinergic receptor, nicotinic, beta 3b (neuronal). (486 aa)
	Chrna5	Cholinergic receptor, nicotinic, alpha 5. (463 aa)
	LOC100534578	Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
	LOC100705513	Uncharacterized protein. (618 aa)
	LOC100691407	Cholinergic receptor, nicotinic, alpha 2b (neuronal). (555 aa)
	LYPD1	LY6/PLAUR domain containing 1. (118 aa)
	LOC100694084	Homer scaffold protein 1b. (405 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chrna5	I3JWT4_ORENI	ENSONIP00000003398	ENSONIP00000048101	Cholinergic receptor, nicotinic, alpha 5.	Uncharacterized protein.	0.465
Chrna5	LOC100690921	ENSONIP00000003398	ENSONIP00000015555	Cholinergic receptor, nicotinic, alpha 5.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.609
Chrna5	LOC100691116	ENSONIP00000003398	ENSONIP00000007179	Cholinergic receptor, nicotinic, alpha 5.	Cholinergic receptor, nicotinic, alpha 7 (neuronal).	0.467
Chrna5	LOC100691407	ENSONIP00000003398	ENSONIP00000019265	Cholinergic receptor, nicotinic, alpha 5.	Cholinergic receptor, nicotinic, alpha 2b (neuronal).	0.609
Chrna5	LOC100696293	ENSONIP00000003398	ENSONIP00000062428	Cholinergic receptor, nicotinic, alpha 5.	Si:ch211-39a7.1.	0.468
Chrna5	LOC100696880	ENSONIP00000003398	ENSONIP00000068214	Cholinergic receptor, nicotinic, alpha 5.	Uncharacterized protein.	0.472
Chrna5	LOC100699483	ENSONIP00000003398	ENSONIP00000071877	Cholinergic receptor, nicotinic, alpha 5.	Uncharacterized protein.	0.469
Chrna5	LOC100703627	ENSONIP00000003398	ENSONIP00000048459	Cholinergic receptor, nicotinic, alpha 5.	Cholinergic receptor, nicotinic, alpha 4b.	0.611
Chrna5	LOC100705513	ENSONIP00000003398	ENSONIP00000007979	Cholinergic receptor, nicotinic, alpha 5.	Uncharacterized protein.	0.464
I3JWT4_ORENI	Chrna5	ENSONIP00000048101	ENSONIP00000003398	Uncharacterized protein.	Cholinergic receptor, nicotinic, alpha 5.	0.465
I3JWT4_ORENI	LOC100690921	ENSONIP00000048101	ENSONIP00000015555	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.498
I3JWT4_ORENI	LOC100691407	ENSONIP00000048101	ENSONIP00000019265	Uncharacterized protein.	Cholinergic receptor, nicotinic, alpha 2b (neuronal).	0.492
I3JWT4_ORENI	LOC100699752	ENSONIP00000048101	ENSONIP00000061610	Uncharacterized protein.	Cholinergic receptor, nicotinic, beta polypeptide 3a.	0.450
I3JWT4_ORENI	LOC100703627	ENSONIP00000048101	ENSONIP00000048459	Uncharacterized protein.	Cholinergic receptor, nicotinic, alpha 4b.	0.496
I3JWT4_ORENI	LOC100708615	ENSONIP00000048101	ENSONIP00000006502	Uncharacterized protein.	Cholinergic receptor, nicotinic, beta 3b (neuronal).	0.464
LOC100690921	Chrna5	ENSONIP00000015555	ENSONIP00000003398	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Cholinergic receptor, nicotinic, alpha 5.	0.609
LOC100690921	I3JWT4_ORENI	ENSONIP00000015555	ENSONIP00000048101	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.498
LOC100690921	LOC100691116	ENSONIP00000015555	ENSONIP00000007179	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Cholinergic receptor, nicotinic, alpha 7 (neuronal).	0.500
LOC100690921	LOC100696293	ENSONIP00000015555	ENSONIP00000062428	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Si:ch211-39a7.1.	0.501
LOC100690921	LOC100696880	ENSONIP00000015555	ENSONIP00000068214	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.501