STRINGSTRING
WDR1 WDR1 LOC100700156 LOC100700156 cracd cracd LOC100696657 LOC100696657 LOC100707023 LOC100707023 carmil1 carmil1 LOC100710447 LOC100710447 LOC100705876 LOC100705876 LOC100690889 LOC100690889 I3JUV2_ORENI I3JUV2_ORENI calcoco2 calcoco2 LOC100690901 LOC100690901 LOC100534578 LOC100534578 plek plek gba gba LOC100700271 LOC100700271 LOC100707347 LOC100707347 bnip3 bnip3 tmem130 tmem130 ENSONIP00000041957 ENSONIP00000041957 EIF5AL1 EIF5AL1 ENSONIP00000030991 ENSONIP00000030991 jmjd4 jmjd4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR1WD repeat domain 1. (606 aa)
LOC100700156Eukaryotic translation initiation factor 5A. (157 aa)
cracdSi:dkeyp-117h8.2. (1172 aa)
LOC100696657Stathmin; Belongs to the stathmin family. (179 aa)
LOC100707023Tax1 (human T-cell leukemia virus type I) binding protein 1a. (1437 aa)
carmil1Uncharacterized protein. (1213 aa)
LOC100710447Uncharacterized protein. (1439 aa)
LOC100705876Zgc:73226. (181 aa)
LOC100690889FYVE and coiled-coil domain containing 1b. (1592 aa)
I3JUV2_ORENISpastin; Belongs to the AAA ATPase family. (495 aa)
calcoco2SKICH domain-containing protein. (582 aa)
LOC100690901FYVE and coiled-coil domain containing 1a. (1495 aa)
LOC100534578Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
plekPleckstrin. (391 aa)
gbaGlucosylceramidase. (544 aa)
LOC100700271Eukaryotic translation initiation factor 5A. (153 aa)
LOC100707347Stathmin; Belongs to the stathmin family. (208 aa)
bnip3BCL2 interacting protein 3. (189 aa)
tmem130Transmembrane protein 130. (314 aa)
ENSONIP00000041957Nestin. (333 aa)
EIF5AL1Eukaryotic translation initiation factor 5A. (155 aa)
ENSONIP00000030991Capping protein regulator and myosin 1 linker 2. (1429 aa)
jmjd4Jumonji domain containing 4. (431 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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