STRINGSTRING
ythdf3 ythdf3 lamp1 lamp1 LOC100710341 LOC100710341 ENSONIP00000005565 ENSONIP00000005565 LOC100704951 LOC100704951 crtam crtam tirap tirap znfx1 znfx1 Polr3f Polr3f n4bp1 n4bp1 nfe2l2 nfe2l2 ube2k ube2k mettl3 mettl3 Cadm1 Cadm1 tomm70 tomm70 ENSONIP00000012226 ENSONIP00000012226 ifi35 ifi35 cactin cactin LOC100702432 LOC100702432 LOC102078975 LOC102078975 mavs mavs ENSONIP00000015699 ENSONIP00000015699 trafd1 trafd1 cd226 cd226 serping1 serping1 lepa lepa LOC100689943 LOC100689943 mul1 mul1 nmi nmi sh2d1a sh2d1a LOC100706746 LOC100706746 LOC100692168 LOC100692168 grn grn Pik3r6 Pik3r6 ikbke ikbke RPS19 RPS19 LOC100702954 LOC100702954 lyar lyar OTOP1 OTOP1 CXorf21 CXorf21 nono nono socs1 socs1 ENSONIP00000026051 ENSONIP00000026051 dcst1 dcst1 supt5h supt5h ENSONIP00000028372 ENSONIP00000028372 I3J018_ORENI I3J018_ORENI ENSONIP00000029780 ENSONIP00000029780 I3KPD0_ORENI I3KPD0_ORENI ENSONIP00000030436 ENSONIP00000030436 ENSONIP00000030679 ENSONIP00000030679 adar adar ENSONIP00000031249 ENSONIP00000031249 LOC100708886 LOC100708886 LOC100692931 LOC100692931 IL12B IL12B ENSONIP00000033379 ENSONIP00000033379 trim62 trim62 ncf1 ncf1 tbk1 tbk1 med1 med1 LOC100709722 LOC100709722 acod1 acod1 sting1 sting1 I3JAG7_ORENI I3JAG7_ORENI ENSONIP00000040857 ENSONIP00000040857 LOC100711382 LOC100711382 Riok3 Riok3 ENSONIP00000041354 ENSONIP00000041354 tyrobp tyrobp ENSONIP00000042545 ENSONIP00000042545 ENSONIP00000042661 ENSONIP00000042661 xrcc6 xrcc6 LOC100689879 LOC100689879 ENSONIP00000043597 ENSONIP00000043597 LOC100701112 LOC100701112 ENSONIP00000044881 ENSONIP00000044881 I3KY55_ORENI I3KY55_ORENI appl1 appl1 LOC100705387 LOC100705387 I3IYR9_ORENI I3IYR9_ORENI LOC100706185 LOC100706185 atg5 atg5 I3JF88_ORENI I3JF88_ORENI dhx58 dhx58 ythdf2 ythdf2 ENSONIP00000054096 ENSONIP00000054096 LOC100693478 LOC100693478 I3K3K4_ORENI I3K3K4_ORENI granulin granulin ttll12 ttll12 ENSONIP00000061033 ENSONIP00000061033 polr3b polr3b ENSONIP00000061557 ENSONIP00000061557 pias4 pias4 I3KAU3_ORENI I3KAU3_ORENI appl2 appl2 LOC100707205 LOC100707205 ENSONIP00000068657 ENSONIP00000068657 tnfaip3 tnfaip3 tkfc tkfc pqbp1 pqbp1 ENSONIP00000071466 ENSONIP00000071466 Fadd Fadd sfpq sfpq xrcc5 xrcc5 ENSONIP00000074128 ENSONIP00000074128 LOC100699154 LOC100699154 Atg12 Atg12 I3KVP0_ORENI I3KVP0_ORENI cav1 cav1 rnf185 rnf185 ENSONIP00000078502 ENSONIP00000078502 polr3d polr3d Nlrx1 Nlrx1 CASP6 CASP6 Lsm14a Lsm14a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (603 aa)
lamp1Lysosomal associated membrane protein 1a. (410 aa)
LOC100710341Akirin 2. (184 aa)
ENSONIP00000005565Matrin 3-like 1.1. (872 aa)
LOC100704951Poly [ADP-ribose] polymerase. (1792 aa)
crtamIg-like domain-containing protein. (444 aa)
tirapToll-interleukin 1 receptor (TIR) domain containing adaptor protein. (291 aa)
znfx1Zinc finger, NFX1-type containing 1. (1953 aa)
Polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
n4bp1Nedd4 binding protein 1. (979 aa)
nfe2l2Nuclear factor, erythroid 2-like 2a. (597 aa)
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (594 aa)
Cadm1Cell adhesion molecule 1a. (400 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (579 aa)
ENSONIP00000012226Granulin a. (1456 aa)
ifi35Interferon-induced protein 35. (374 aa)
cactinCactin. (875 aa)
LOC100702432Uncharacterized protein. (441 aa)
LOC102078975Caspase recruitment domain family, member 9. (531 aa)
mavsCARD_2 domain-containing protein. (552 aa)
ENSONIP00000015699Deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like. (431 aa)
trafd1TRAF-type zinc finger domain containing 1. (590 aa)
cd226CD226 molecule. (393 aa)
serping1Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family. (653 aa)
lepaLeptin A. (161 aa)
LOC100689943Ribosomal protein S19. (163 aa)
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
nmiUncharacterized protein. (386 aa)
sh2d1aSH2 domain containing 1A duplicate b. (154 aa)
LOC100706746Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (358 aa)
LOC100692168Immunoresponsive gene 1, like. (495 aa)
grnGranulin b. (827 aa)
Pik3r6Phosphoinositide-3-kinase regulatory subunit 6. (544 aa)
ikbkeInhibitor of nuclear factor kappa B kinase subunit epsilon. (721 aa)
RPS19Ribosomal protein S19. (175 aa)
LOC100702954Interferon regulatory factor 3. (466 aa)
lyarLy1 antibody reactive. (358 aa)
OTOP1Otopetrin 1. (596 aa)
CXorf21Chromosome X open reading frame 21. (317 aa)
nonoNon-POU domain containing, octamer-binding. (442 aa)
socs1Uncharacterized protein. (215 aa)
ENSONIP00000026051annotation not available (759 aa)
dcst1DC-STAMP domain containing 1. (654 aa)
supt5hTranscription elongation factor SPT5. (1087 aa)
ENSONIP00000028372annotation not available (935 aa)
I3J018_ORENISi:dkey-175m17.7; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (934 aa)
ENSONIP00000029780annotation not available (203 aa)
I3KPD0_ORENILSM14A mRNA processing body assembly factor a. (99 aa)
ENSONIP00000030436annotation not available (307 aa)
ENSONIP00000030679annotation not available (116 aa)
adarAdenosine deaminase RNA specific. (1363 aa)
ENSONIP00000031249annotation not available (107 aa)
LOC100708886Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC100692931GRANULINS domain-containing protein. (211 aa)
IL12BInterleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (318 aa)
ENSONIP00000033379annotation not available (311 aa)
trim62Tripartite motif containing 62, tandem duplicate 1. (524 aa)
ncf1Neutrophil cytosolic factor 1. (421 aa)
tbk1TANK-binding kinase 1. (746 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1834 aa)
LOC100709722EGF-like domain-containing protein. (133 aa)
acod1Aconitate decarboxylase 1. (473 aa)
sting1Stimulator of interferon genes protein. (403 aa)
I3JAG7_ORENIUncharacterized protein. (403 aa)
ENSONIP00000040857annotation not available (413 aa)
LOC100711382Akirin 2. (202 aa)
Riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (507 aa)
ENSONIP00000041354annotation not available (1013 aa)
tyrobpTYRO protein tyrosine kinase binding protein. (111 aa)
ENSONIP00000042545annotation not available (145 aa)
ENSONIP00000042661annotation not available (545 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (633 aa)
LOC100689879SH2 domain-containing protein 1B. (165 aa)
ENSONIP00000043597annotation not available (486 aa)
LOC100701112RNA binding motif protein 4.3. (358 aa)
ENSONIP00000044881Uncharacterized protein LOC109196856. (573 aa)
I3KY55_ORENIReverse transcriptase domain-containing protein. (792 aa)
appl1Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (708 aa)
LOC100705387SAM domain and HD domain 1. (622 aa)
I3IYR9_ORENIUncharacterized protein. (415 aa)
LOC100706185Deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like. (607 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (276 aa)
I3JF88_ORENIDual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (444 aa)
dhx58Probable ATP-dependent RNA helicase DHX58. (713 aa)
ythdf2YTH N(6)-methyladenosine RNA binding protein 2. (638 aa)
ENSONIP00000054096annotation not available (205 aa)
LOC100693478Progranulin. (210 aa)
I3K3K4_ORENIHD domain-containing protein. (466 aa)
granulinProgranulin. (206 aa)
ttll12Tubulin tyrosine ligase-like family, member 12. (700 aa)
ENSONIP00000061033annotation not available (496 aa)
polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
ENSONIP00000061557annotation not available (350 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
I3KAU3_ORENIInsulin-like growth factor 2b. (217 aa)
appl2Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (668 aa)
LOC100707205G_PROTEIN_RECEP_F1_2 domain-containing protein. (342 aa)
ENSONIP00000068657Deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like. (98 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (861 aa)
tkfcTriokinase/FMN cyclase. (580 aa)
pqbp1Polyglutamine binding protein 1. (235 aa)
ENSONIP00000071466annotation not available (367 aa)
FaddUncharacterized protein. (209 aa)
sfpqSplicing factor proline/glutamine-rich. (676 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (746 aa)
ENSONIP00000074128Uncharacterized protein LOC109204916. (948 aa)
LOC100699154Cell adhesion molecule 1b. (420 aa)
Atg12Ubiquitin-like protein ATG12. (225 aa)
I3KVP0_ORENIIg-like domain-containing protein; Belongs to the MHC class I family. (410 aa)
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (181 aa)
rnf185Ring finger protein 185. (172 aa)
ENSONIP00000078502annotation not available (107 aa)
polr3dPolymerase (RNA) III (DNA directed) polypeptide D. (478 aa)
Nlrx1NLR family member X1. (985 aa)
CASP6Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (313 aa)
Lsm14aLSM14A mRNA processing body assembly factor. (106 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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